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Os02g0324700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0317) R2 : 0.863
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.45 (0.0873) R2dC : 0.579 R2C : 0.773
β3 : -2.2 (0.144) R2dE : 0.0868 R2E : 0.278
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.204 (0.0668) R2dN8 : 0.00373 R2N8 : 0.00409
σ : 0.596
deviance : 163.57
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_____
C
peak time of C : 14.8
E
wheather : temperature
threshold : 20.9
memory length : 40
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.97
open length of G : 2.92

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
155.56 0.586 11.8 0.164 3.45 -2.06 0.774 -2.68 -0.201 14.8 21.05 35 2.98 2.92
157.46 0.584 11.8 0.332 3.48 -2.12 0.955 -- -0.182 14.9 20.93 37 3 2.95
157.45 0.584 11.8 0.148 3.45 -2.11 -- -3.34 -0.2 14.8 21.29 34 3.02 2.9
160.31 0.59 11.8 0.35 3.44 -2.23 -- -- -0.174 14.8 20.9 39 2.99 2.92
493 1.03 11.7 0.612 -- -3.65 -- -2.31 0.211 -- -2.95 198 0.0167 5.05
230.19 0.711 11.8 0.171 4.08 -- 1.61 -- -0.15 15.2 -- -- -- --
238.55 0.723 11.8 0.203 4.09 -- -- -- -0.14 15.2 -- -- -- --
485.9 1.03 11.7 0.401 -- -3.59 -- -- 0.0955 -- -2.58 152 0.016 5.62
163.57 0.596 11.8 -- 3.45 -2.2 -- -- -0.204 14.8 20.9 40 2.97 2.92
1186.66 1.61 11.8 0.0294 -- -- -- -- -0.248 -- -- -- -- --
239.64 0.724 11.8 -- 4.08 -- -- -- -0.163 15.2 -- -- -- --
488.16 1.03 11.7 -- -- -3.63 -- -- 0.00696 -- -0.6961 154 0.0167 5.58
1186.68 1.61 11.8 -- -- -- -- -- -0.251 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 157.80 temperature 20.0 30 > th dose dependent rect. 3 3
5 162.75 wind 5.0 10 < th dose dependent rect. 3 3
6 163.11 wind 5.0 90 < th dose dependent rect. 3 2
11 164.19 wind 3.0 90 < th dose independent rect. 3 2
18 165.58 temperature 20.0 10 > th dose independent rect. 3 3
19 165.67 precipitation 0.1 90 < th dose independent rect. 3 2
20 165.67 precipitation 0.1 90 < th dose dependent rect. 3 2
21 165.80 wind 5.0 270 < th dose dependent rect. 1 2
24 166.15 wind 3.0 270 < th dose independent rect. 1 3
32 166.90 atmosphere 1015.0 90 < th dose dependent rect. 3 2
35 167.34 temperature 10.0 270 > th dose dependent rect. 24 14
48 168.51 radiation 20.0 14400 < th dose independent rect. 3 3
49 168.56 radiation 1.0 90 < th dose independent rect. 3 2
51 168.57 precipitation 0.1 10 < th dose independent rect. 3 3
52 168.57 precipitation 0.1 10 < th dose dependent rect. 3 3
54 168.58 temperature 10.0 90 > th dose independent rect. 3 2
56 168.58 temperature 30.0 90 < th dose independent rect. 3 2
57 168.58 humidity 50.0 90 > th dose independent rect. 3 2
60 168.58 atmosphere 995.0 90 > th dose independent rect. 3 2
61 168.58 atmosphere 1010.0 90 < th dose independent rect. 3 2
66 168.58 temperature 10.0 90 > th dose independent rect. 5 22
68 168.59 radiation 40.0 90 < th dose dependent rect. 3 2
75 168.94 wind 9.0 90 < th dose independent rect. 5 22
76 169.03 humidity 50.0 90 > th dose dependent rect. 3 2
87 170.02 temperature 30.0 270 < th dose dependent rect. 5 4
90 170.20 radiation 10.0 10 < th dose independent rect. 3 3
97 170.97 precipitation 0.1 270 < th dose independent rect. 24 14
98 170.97 precipitation 0.1 270 < th dose dependent rect. 24 14
111 171.45 wind 7.0 270 < th dose dependent rect. 23 6
119 172.01 wind 5.0 270 < th dose independent rect. 23 6
125 172.23 humidity 50.0 720 > th dose dependent rect. 19 6
132 172.78 temperature 10.0 10 > th dose independent rect. 3 3
134 172.78 temperature 30.0 10 < th dose independent rect. 3 3
135 172.78 humidity 50.0 10 > th dose independent rect. 3 3
138 172.78 atmosphere 995.0 10 > th dose independent rect. 3 3
139 172.78 atmosphere 1010.0 10 < th dose independent rect. 3 3
144 172.78 temperature 10.0 10 > th dose independent rect. 6 21
153 173.08 radiation 40.0 10 < th dose dependent rect. 3 3
160 173.32 wind 9.0 10 < th dose independent rect. 6 21
162 173.34 atmosphere 1015.0 270 < th dose dependent rect. 1 2
176 173.86 atmosphere 1015.0 10 < th dose dependent rect. 3 3
194 174.10 humidity 50.0 10 > th dose dependent rect. 3 3
195 174.11 radiation 40.0 1440 < th dose dependent rect. 18 9
200 174.20 precipitation 0.1 10 < th dose independent rect. 6 21
201 174.20 precipitation 0.1 10 < th dose dependent rect. 6 21
229 174.96 precipitation 0.1 270 < th dose independent rect. 1 3
231 174.96 precipitation 0.1 270 < th dose dependent rect. 1 3
233 174.97 precipitation 0.1 90 < th dose independent rect. 5 22
236 174.97 precipitation 0.1 90 < th dose dependent rect. 5 22
237 175.00 temperature 15.0 270 > th dose independent rect. 3 22
242 175.17 humidity 60.0 14400 > th dose independent rect. 3 4
273 175.85 temperature 10.0 270 > th dose independent rect. 1 2
275 175.85 temperature 30.0 270 < th dose independent rect. 1 2
276 175.85 humidity 50.0 270 > th dose independent rect. 1 2
279 175.85 atmosphere 995.0 270 > th dose independent rect. 1 2
280 175.85 atmosphere 1010.0 270 < th dose independent rect. 1 2
282 175.85 radiation 1.0 270 < th dose independent rect. 1 2
288 175.85 radiation 1.0 270 < th dose dependent rect. 1 2
299 176.07 atmosphere 1005.0 90 > th dose independent rect. 3 2
303 176.11 atmosphere 995.0 90 > th dose independent rect. 5 22
308 176.24 temperature 10.0 270 > th dose independent rect. 14 10
309 176.24 temperature 10.0 270 > th dose independent rect. 24 14
310 176.24 atmosphere 995.0 270 > th dose independent rect. 24 14
311 176.25 atmosphere 1015.0 270 < th dose independent rect. 24 14
313 176.31 wind 9.0 270 < th dose independent rect. 24 14
335 176.84 precipitation 0.1 270 < th dose independent rect. 23 6
336 176.84 precipitation 0.1 270 < th dose dependent rect. 23 6
338 176.89 humidity 50.0 270 > th dose dependent rect. 1 2
339 176.97 wind 9.0 270 < th dose independent rect. 3 22
344 177.07 atmosphere 995.0 10 > th dose independent rect. 6 21
352 177.30 temperature 15.0 270 > th dose independent rect. 9 20
358 177.43 radiation 40.0 270 < th dose independent rect. 14 10
362 177.51 humidity 80.0 720 > th dose dependent rect. 21 2
365 177.54 temperature 15.0 10 > th dose independent rect. 12 18
366 177.55 precipitation 0.1 270 < th dose independent rect. 9 20
367 177.55 precipitation 0.1 270 < th dose dependent rect. 9 20
386 177.96 wind 9.0 270 < th dose independent rect. 14 10
442 178.24 wind 7.0 10 < th dose independent rect. 12 18
443 178.24 wind 9.0 10 < th dose dependent rect. 12 18
458 178.34 precipitation 0.1 10 < th dose independent rect. 12 18
461 178.34 precipitation 0.1 10 < th dose dependent rect. 12 18
499 178.66 atmosphere 1015.0 1440 < th dose independent rect. 3 4
511 178.81 temperature 10.0 720 > th dose dependent rect. 17 12
518 178.90 humidity 70.0 720 < th dose independent rect. 19 12
519 178.91 atmosphere 995.0 90 > th dose dependent rect. 3 2
521 178.93 temperature 30.0 1440 > th dose dependent rect. 18 15
529 179.02 radiation 30.0 1440 < th dose independent rect. 3 4
532 179.05 humidity 70.0 720 > th dose independent rect. 19 7
540 179.27 temperature 25.0 720 > th dose dependent rect. 18 10
547 179.35 atmosphere 1015.0 10 < th dose independent rect. 6 21
568 179.56 temperature 30.0 1440 > th dose dependent rect. 18 1
587 179.65 humidity 80.0 720 < th dose dependent rect. 19 2
598 179.76 temperature 30.0 270 < th dose independent rect. 5 4
605 179.83 wind 9.0 270 < th dose independent rect. 9 20
606 179.84 temperature 15.0 270 > th dose independent rect. 23 6
619 179.98 humidity 70.0 1440 > th dose independent rect. 3 4
629 180.03 humidity 70.0 1440 > th dose independent rect. 19 12
639 180.12 atmosphere 1005.0 10 > th dose independent rect. 3 3
662 180.17 atmosphere 995.0 270 > th dose dependent rect. 5 4
666 180.26 wind 7.0 270 < th dose independent rect. 5 4
682 180.33 radiation 1.0 270 < th dose independent rect. 23 6
689 180.36 radiation 10.0 270 < th dose dependent rect. 23 6
692 180.37 temperature 10.0 270 > th dose independent rect. 5 4
694 180.37 humidity 50.0 270 > th dose independent rect. 5 4
695 180.37 atmosphere 995.0 270 > th dose independent rect. 5 4
696 180.37 atmosphere 1015.0 270 < th dose independent rect. 5 4
698 180.37 temperature 30.0 270 < th dose independent rect. 23 6
699 180.37 humidity 50.0 270 > th dose independent rect. 23 6
702 180.37 atmosphere 995.0 270 > th dose independent rect. 23 6
706 180.37 temperature 10.0 270 > th dose independent rect. 5 18
742 180.59 wind 9.0 10 < th dose independent rect. 6 6
743 180.60 humidity 70.0 720 < th dose independent rect. 19 1
759 180.63 temperature 10.0 10 > th dose independent rect. 6 6
761 180.63 atmosphere 995.0 10 > th dose independent rect. 6 6
762 180.63 atmosphere 1015.0 10 < th dose independent rect. 6 6
764 180.67 precipitation 0.1 270 < th dose independent rect. 5 4
767 180.67 precipitation 0.1 270 < th dose dependent rect. 5 4
802 180.91 precipitation 0.1 10 < th dose independent rect. 6 6
803 180.91 precipitation 0.1 10 < th dose dependent rect. 6 6
820 180.97 wind 9.0 270 < th dose independent rect. 5 18
826 181.00 atmosphere 1015.0 270 < th dose independent rect. 23 6
847 181.21 humidity 70.0 14400 > th dose independent rect. 19 1
853 181.30 humidity 70.0 1440 > th dose independent rect. 19 2
868 181.44 humidity 50.0 270 > th dose independent rect. 24 14
871 181.46 wind 9.0 1440 < th dose independent rect. 3 4
872 181.46 temperature 10.0 1440 > th dose independent rect. 3 4
875 181.46 temperature 30.0 1440 < th dose independent rect. 3 4
879 181.46 humidity 50.0 1440 > th dose independent rect. 3 4
884 181.46 atmosphere 995.0 1440 > th dose independent rect. 3 4
889 181.46 temperature 10.0 1440 > th dose independent rect. 7 20
893 181.49 humidity 70.0 14400 > th dose independent rect. 19 12
938 181.72 humidity 70.0 720 < th dose dependent rect. 19 12
940 181.74 precipitation 0.1 270 < th dose independent rect. 14 10
942 181.74 precipitation 0.1 270 < th dose dependent rect. 14 10
967 182.00 temperature 30.0 1440 < th dose independent rect. 18 13
973 182.05 wind 1.0 10 > th dose independent rect. 6 6
975 182.06 humidity 50.0 270 > th dose dependent rect. 5 4