Os02g0324200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0324200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.56 | 0.547 | 5.67 | -1.6 | 0.519 | -2.07 | 0.282 | -0.323 | -0.0842 | 2.94 | 22.55 | 329 | -- | -- |
| 135.6 | 0.542 | 5.68 | -1.62 | 0.525 | -1.98 | 0.232 | -- | -0.0912 | 2.85 | 22.67 | 313 | -- | -- |
| 135.77 | 0.543 | 5.68 | -1.62 | 0.528 | -2.02 | -- | -0.14 | -0.0892 | 2.91 | 22.62 | 313 | -- | -- |
| 135.79 | 0.543 | 5.68 | -1.63 | 0.527 | -1.99 | -- | -- | -0.0921 | 2.91 | 22.66 | 313 | -- | -- |
| 146.72 | 0.564 | 5.69 | -1.65 | -- | -1.66 | -- | 0.388 | -0.113 | -- | 23.3 | 575 | -- | -- |
| 177.39 | 0.624 | 5.62 | -1.18 | 0.378 | -- | 0.306 | -- | 0.168 | 2.29 | -- | -- | -- | -- |
| 177.73 | 0.624 | 5.62 | -1.18 | 0.38 | -- | -- | -- | 0.166 | 2.38 | -- | -- | -- | -- |
| 146.89 | 0.564 | 5.68 | -1.61 | -- | -1.74 | -- | -- | -0.111 | -- | 23.28 | 574 | -- | -- |
| 197.39 | 0.658 | 5.62 | -- | 0.511 | -1.17 | -- | -- | 0.182 | 1.86 | 22.66 | 313 | -- | -- |
| 186.27 | 0.638 | 5.62 | -1.17 | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
| 214.7 | 0.685 | 5.59 | -- | 0.357 | -- | -- | -- | 0.298 | 2.33 | -- | -- | -- | -- |
| 206.98 | 0.67 | 5.62 | -- | -- | -1.01 | -- | -- | 0.169 | -- | 23.37 | 537 | -- | -- |
| 222.28 | 0.696 | 5.59 | -- | -- | -- | -- | -- | 0.305 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.73 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 21 |
| 6 | 138.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 7 | 138.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 9 | 139.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 16 | 139.60 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 17 | 139.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 18 | 139.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 32 | 140.64 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 35 | 140.80 | wind | 9.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 42 | 141.08 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 46 | 141.14 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 75 | 141.92 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 14 |
| 76 | 141.97 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 17 |
| 88 | 142.14 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 93 | 142.21 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 95 | 142.21 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 102 | 142.28 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 104 | 142.29 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 105 | 142.30 | temperature | 20.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 106 | 142.30 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 118 | 142.36 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 145 | 142.61 | temperature | 25.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 158 | 142.69 | wind | 9.0 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 162 | 142.70 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 18 | 21 |
| 197 | 143.02 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 205 | 143.08 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 227 | 143.25 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 255 | 143.44 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 257 | 143.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 258 | 143.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 270 | 143.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 272 | 143.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 278 | 143.58 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 280 | 143.60 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 16 | 23 |
| 292 | 143.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 293 | 143.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 304 | 143.84 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 312 | 143.91 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 316 | 143.92 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 17 |
| 324 | 143.96 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 22 |
| 325 | 143.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 331 | 144.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 332 | 144.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 344 | 144.05 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 349 | 144.07 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 351 | 144.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 10 |
| 358 | 144.11 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 373 | 144.16 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 22 | 15 |
| 381 | 144.20 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 389 | 144.22 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 403 | 144.32 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 407 | 144.33 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 410 | 144.34 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 419 | 144.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 422 | 144.38 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 20 |
| 424 | 144.38 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 6 |
| 435 | 144.41 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 445 | 144.47 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 449 | 144.49 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 454 | 144.50 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 12 | 18 |
| 461 | 144.53 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 464 | 144.53 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 12 | 7 |
| 468 | 144.53 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 476 | 144.56 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 17 |
| 478 | 144.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 23 |
| 479 | 144.57 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 10 |
| 486 | 144.58 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 499 | 144.61 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 501 | 144.62 | temperature | 20.0 | 720 | > th | dose independent | rect. | 11 | 20 |
| 519 | 144.67 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 544 | 144.70 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 553 | 144.73 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 570 | 144.78 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 573 | 144.78 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 582 | 144.80 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 611 | 144.88 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 616 | 144.89 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 651 | 144.98 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 662 | 145.00 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 709 | 145.06 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 732 | 145.11 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 755 | 145.15 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 781 | 145.20 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 9 |
| 804 | 145.25 | temperature | 20.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 814 | 145.26 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 13 |
| 817 | 145.26 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 835 | 145.29 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 871 | 145.36 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 873 | 145.36 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 886 | 145.38 | temperature | 20.0 | 270 | < th | dose independent | rect. | 8 | 23 |
| 902 | 145.40 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 919 | 145.43 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 921 | 145.44 | temperature | 20.0 | 4320 | < th | dose dependent | no | NA | NA |
| 926 | 145.45 | temperature | 20.0 | 270 | < th | dose independent | rect. | 15 | 22 |
| 942 | 145.47 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 20 | 10 |
| 967 | 145.50 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 986 | 145.51 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |