Os02g0320300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0320300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 315.72 | 0.835 | 4.73 | -1.11 | 0.465 | 2 | 0.134 | 0.219 | -0.782 | 23.8 | 24.86 | 114 | -- | -- |
| 315.74 | 0.828 | 4.74 | -1.14 | 0.465 | 2.02 | 0.114 | -- | -0.787 | 23.7 | 24.89 | 113 | -- | -- |
| 315.79 | 0.828 | 4.73 | -1.12 | 0.463 | 1.99 | -- | 0.135 | -0.783 | 23.6 | 24.88 | 113 | -- | -- |
| 315.79 | 0.828 | 4.74 | -1.14 | 0.463 | 2.01 | -- | -- | -0.785 | 23.6 | 24.91 | 113 | -- | -- |
| 323.19 | 0.837 | 4.73 | -1.05 | -- | 1.72 | -- | 0.755 | -0.805 | -- | 24.22 | 263 | -- | -- |
| 380.84 | 0.915 | 4.71 | -0.811 | 0.751 | -- | -0.00203 | -- | -0.621 | 18.1 | -- | -- | -- | -- |
| 380.84 | 0.914 | 4.71 | -0.811 | 0.751 | -- | -- | -- | -0.621 | 18.1 | -- | -- | -- | -- |
| 323.81 | 0.838 | 4.73 | -1.11 | -- | 1.74 | -- | -- | -0.807 | -- | 24.27 | 258 | -- | -- |
| 348.54 | 0.87 | 4.69 | -- | 0.399 | 1.77 | -- | -- | -0.61 | 22.8 | 25.27 | 113 | -- | -- |
| 410.08 | 0.946 | 4.69 | -0.833 | -- | -- | -- | -- | -0.638 | -- | -- | -- | -- | -- |
| 398.19 | 0.933 | 4.69 | -- | 0.763 | -- | -- | -- | -0.531 | 18 | -- | -- | -- | -- |
| 355.56 | 0.878 | 4.7 | -- | -- | 1.59 | -- | -- | -0.65 | -- | 24.6 | 255 | -- | -- |
| 428.38 | 0.966 | 4.67 | -- | -- | -- | -- | -- | -0.546 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 308.86 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 2 | 309.43 | temperature | 25 | 720 | > th | dose dependent | rect. | 10 | 1 |
| 4 | 310.67 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 22 |
| 5 | 310.73 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 20 |
| 8 | 310.80 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 14 |
| 24 | 311.87 | temperature | 10 | 270 | > th | dose dependent | sin | 0 | NA |
| 26 | 311.92 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 18 |
| 30 | 312.01 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 4 |
| 35 | 312.15 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 12 |
| 40 | 312.19 | temperature | 30 | 90 | < th | dose dependent | sin | 22 | NA |
| 43 | 312.26 | temperature | 10 | 90 | > th | dose dependent | sin | 22 | NA |
| 56 | 312.55 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 67 | 312.92 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 6 |
| 70 | 313.18 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 9 |
| 97 | 314.08 | temperature | 10 | 10 | > th | dose dependent | sin | 21 | NA |
| 100 | 314.13 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 107 | 314.23 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 152 | 314.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 14 |
| 158 | 314.99 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 181 | 315.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 11 |
| 204 | 315.86 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 3 |
| 246 | 316.40 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 249 | 316.41 | temperature | 25 | 720 | > th | dose dependent | rect. | 24 | 14 |
| 264 | 316.53 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 268 | 316.57 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 1 |
| 287 | 316.74 | temperature | 25 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 461 | 318.33 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 3 |
| 487 | 318.59 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 8 |
| 704 | 320.50 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 734 | 320.69 | temperature | 30 | 720 | > th | dose independent | rect. | 10 | 4 |
| 749 | 320.75 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 16 |
| 805 | 321.23 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 6 |
| 879 | 321.53 | temperature | 30 | 720 | > th | dose independent | sin | 4 | NA |
| 949 | 322.06 | temperature | 30 | 720 | < th | dose independent | sin | 1 | NA |