Os02g0319800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os02g0319800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.1 | 0.221 | 9.71 | -0.278 | 0.707 | 0.704 | -0.0115 | 1.13 | -0.0268 | 12.3 | 19.67 | 1606 | -- | -- |
| 23.3 | 0.225 | 9.75 | -0.561 | 0.714 | 0.714 | -0.0224 | -- | -0.108 | 12.3 | 20.58 | 1561 | -- | -- |
| 22.1 | 0.219 | 9.71 | -0.276 | 0.706 | 0.701 | -- | 1.13 | -0.0269 | 12.2 | 19.8 | 1631 | -- | -- |
| 23.27 | 0.225 | 9.75 | -0.599 | 0.706 | 0.733 | -- | -- | -0.115 | 12.2 | 20.76 | 1631 | -- | -- |
| 34.56 | 0.275 | 9.77 | -0.543 | -- | 1.23 | -- | 0.279 | -0.139 | -- | 19.7 | 1660 | -- | -- |
| 39.94 | 0.296 | 9.71 | -0.324 | 0.69 | -- | -0.0397 | -- | 0.0579 | 12.3 | -- | -- | -- | -- |
| 39.95 | 0.296 | 9.71 | -0.326 | 0.69 | -- | -- | -- | 0.0577 | 12.3 | -- | -- | -- | -- |
| 34.09 | 0.273 | 9.78 | -0.635 | -- | 1.58 | -- | -- | -0.163 | -- | 12.89 | 1648 | -- | -- |
| 31.26 | 0.26 | 9.73 | -- | 0.719 | 0.545 | -- | -- | -0.0142 | 12.3 | 22.38 | 1600 | -- | -- |
| 69.93 | 0.391 | 9.73 | -0.349 | -- | -- | -- | -- | 0.047 | -- | -- | -- | -- | -- |
| 42.74 | 0.306 | 9.71 | -- | 0.695 | -- | -- | -- | 0.094 | 12.3 | -- | -- | -- | -- |
| 43.26 | 0.307 | 9.75 | -- | -- | 1.14 | -- | -- | -0.0708 | -- | 19.6 | 10 | -- | -- |
| 73.13 | 0.399 | 9.72 | -- | -- | -- | -- | -- | 0.0856 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.69 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 4 | 21.80 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 6 | 21.81 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 7 | 21.82 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 10 | 21.85 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 25 | 21.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 20 |
| 28 | 21.99 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 29 | 21.99 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 33 | 22.01 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 34 | 22.01 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 55 | 22.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 11 |
| 75 | 22.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 83 | 22.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 21 |
| 85 | 22.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 17 |
| 98 | 22.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 15 |
| 101 | 22.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 13 |
| 111 | 22.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 123 | 22.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 125 | 22.18 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 126 | 22.18 | temperature | 20 | 1440 | > th | dose dependent | sin | 6 | NA |
| 168 | 22.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 181 | 22.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 21 |
| 200 | 22.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 202 | 22.25 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 236 | 22.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 256 | 22.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 262 | 22.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 265 | 22.28 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 286 | 22.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 289 | 22.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 337 | 22.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 340 | 22.31 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 355 | 22.31 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 360 | 22.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 10 |
| 382 | 22.32 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 405 | 22.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 15 |
| 597 | 22.40 | temperature | 20 | 4320 | > th | dose dependent | sin | 12 | NA |
| 819 | 22.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 820 | 22.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 882 | 22.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 903 | 22.55 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 920 | 22.56 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |