Os02g0319300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione S-transferase, C-terminal-like domain containing protein.
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Os02g0319300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione S-transferase, C-terminal-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.06 | 0.297 | 11.7 | -0.0135 | 0.37 | 0.566 | -0.012 | 0.753 | -0.268 | 13.1 | 69.96 | 4364 | -- | -- |
| 40.84 | 0.298 | 11.7 | -0.0166 | 0.373 | 0.587 | -0.0143 | -- | -0.281 | 13.1 | 69.97 | 4310 | -- | -- |
| 40.06 | 0.295 | 11.7 | -0.0139 | 0.369 | 0.566 | -- | 0.751 | -0.268 | 13.1 | 69.97 | 4365 | -- | -- |
| 40.61 | 0.297 | 11.7 | -0.046 | 0.37 | 0.581 | -- | -- | -0.239 | 13.1 | 68 | 4282 | -- | -- |
| 47.61 | 0.321 | 11.7 | -0.0236 | -- | 0.667 | -- | 0.677 | -0.322 | -- | 71 | 4625 | -- | -- |
| 47.07 | 0.322 | 11.7 | -0.0446 | 0.366 | -- | -0.0717 | -- | -0.223 | 12.9 | -- | -- | -- | -- |
| 47.09 | 0.321 | 11.7 | -0.0471 | 0.367 | -- | -- | -- | -0.223 | 13 | -- | -- | -- | -- |
| 48.01 | 0.323 | 11.7 | -0.0584 | -- | 0.584 | -- | -- | -0.216 | -- | 67 | 4612 | -- | -- |
| 40.66 | 0.297 | 11.7 | -- | 0.371 | 0.608 | -- | -- | -0.231 | 13.1 | 68.07 | 4305 | -- | -- |
| 55.45 | 0.348 | 11.7 | -0.0608 | -- | -- | -- | -- | -0.23 | -- | -- | -- | -- | -- |
| 47.15 | 0.321 | 11.7 | -- | 0.367 | -- | -- | -- | -0.218 | 13 | -- | -- | -- | -- |
| 47.89 | 0.322 | 11.7 | -- | -- | 0.682 | -- | -- | -0.192 | -- | 68 | 4561 | -- | -- |
| 55.55 | 0.348 | 11.7 | -- | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.31 | humidity | 80 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 2 | 38.35 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 3 | 38.39 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 4 | 38.44 | humidity | 80 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 5 | 38.67 | humidity | 80 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 7 | 38.74 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 9 | 38.78 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 3 |
| 13 | 38.85 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 14 | 38.87 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 15 | 38.88 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 16 | 38.92 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 21 | 39.06 | humidity | 80 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 22 | 39.07 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 24 | 39.07 | humidity | 70 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 26 | 39.08 | humidity | 70 | 4320 | > th | dose independent | rect. | 6 | 7 |
| 31 | 39.08 | humidity | 70 | 4320 | > th | dose independent | rect. | 23 | 14 |
| 38 | 39.13 | humidity | 60 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 44 | 39.19 | humidity | 70 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 101 | 39.34 | humidity | 90 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 103 | 39.35 | radiation | 10 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 105 | 39.35 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 136 | 39.44 | humidity | 70 | 4320 | < th | dose independent | sin | 5 | NA |
| 139 | 39.45 | humidity | 70 | 4320 | > th | dose independent | sin | 5 | NA |
| 169 | 39.52 | humidity | 90 | 4320 | < th | dose dependent | rect. | 4 | 10 |
| 265 | 39.64 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 339 | 39.71 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 358 | 39.74 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 410 | 39.79 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 519 | 39.89 | humidity | 70 | 4320 | > th | dose independent | rect. | 16 | 21 |
| 544 | 39.92 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 546 | 39.92 | humidity | 90 | 4320 | < th | dose dependent | sin | 4 | NA |
| 702 | 40.06 | humidity | 60 | 14400 | < th | dose dependent | sin | 14 | NA |
| 717 | 40.08 | humidity | 70 | 4320 | < th | dose independent | no | NA | NA |
| 788 | 40.09 | radiation | 10 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 821 | 40.10 | wind | 1 | 43200 | < th | dose independent | sin | 7 | NA |
| 842 | 40.10 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 861 | 40.11 | humidity | 60 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 867 | 40.11 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 969 | 40.16 | humidity | 70 | 4320 | > th | dose independent | no | NA | NA |