Os02g0316900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0316900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.91 | 0.409 | 8.79 | 0.125 | 0.617 | 0.459 | -0.563 | 0.6 | 0.395 | 3.03 | 55.25 | 27 | -- | -- |
| 76.37 | 0.407 | 8.79 | 0.147 | 0.627 | 0.492 | -0.212 | -- | 0.396 | 3.07 | 51 | 24 | -- | -- |
| 76.66 | 0.408 | 8.79 | 0.127 | 0.617 | 0.465 | -- | 0.401 | 0.401 | 2.92 | 53.75 | 38 | -- | -- |
| 76.51 | 0.407 | 8.79 | 0.152 | 0.632 | 0.477 | -- | -- | 0.397 | 3.05 | 51.71 | 24 | -- | -- |
| 85.73 | 0.431 | 8.78 | 0.131 | -- | 0.846 | -- | 0.166 | 0.443 | -- | 68 | 45 | -- | -- |
| 80.2 | 0.42 | 8.79 | 0.147 | 0.923 | -- | -0.084 | -- | 0.384 | 2.91 | -- | -- | -- | -- |
| 80.22 | 0.419 | 8.79 | 0.149 | 0.923 | -- | -- | -- | 0.384 | 2.91 | -- | -- | -- | -- |
| 85.67 | 0.431 | 8.78 | 0.148 | -- | 0.849 | -- | -- | 0.462 | -- | 68 | 28 | -- | -- |
| 77.12 | 0.409 | 8.79 | -- | 0.636 | 0.472 | -- | -- | 0.38 | 3.06 | 52 | 24 | -- | -- |
| 129.32 | 0.531 | 8.79 | 0.189 | -- | -- | -- | -- | 0.408 | -- | -- | -- | -- | -- |
| 80.81 | 0.421 | 8.8 | -- | 0.926 | -- | -- | -- | 0.368 | 2.91 | -- | -- | -- | -- |
| 86.34 | 0.433 | 8.78 | -- | -- | 0.853 | -- | -- | 0.451 | -- | 68.1 | 28 | -- | -- |
| 130.26 | 0.533 | 8.79 | -- | -- | -- | -- | -- | 0.387 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.11 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 2 | 73.27 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 3 | 73.30 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 4 | 73.36 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 5 | 73.44 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 6 | 73.45 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 7 | 73.45 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 3 | 16 |
| 8 | 73.49 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 9 | 73.49 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 12 | 73.57 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 15 | 73.65 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 21 | 73.75 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 22 | 73.75 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 23 | 73.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 24 | 73.75 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 25 | 73.80 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 33 | 73.87 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 40 | 73.95 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 6 |
| 46 | 73.99 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 52 | 74.02 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 19 |
| 54 | 74.05 | wind | 5.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 61 | 74.09 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 17 |
| 82 | 74.22 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 93 | 74.29 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 100 | 74.33 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 17 |
| 118 | 74.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 134 | 74.43 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 144 | 74.46 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 159 | 74.50 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 170 | 74.53 | wind | 1.0 | 14400 | < th | dose independent | rect. | 17 | 19 |
| 192 | 74.59 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 195 | 74.59 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 240 | 74.69 | wind | 1.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 244 | 74.70 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 258 | 74.71 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 260 | 74.72 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 263 | 74.72 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 277 | 74.75 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 291 | 74.77 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 22 |
| 350 | 74.88 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 355 | 74.88 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 366 | 74.90 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 374 | 74.90 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 375 | 74.91 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 378 | 74.91 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 383 | 74.92 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 413 | 74.95 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 419 | 74.95 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 3 |
| 423 | 74.95 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 16 | 20 |
| 426 | 74.96 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 434 | 74.96 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 436 | 74.96 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 14 | 23 |
| 441 | 74.97 | humidity | 80.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 466 | 74.99 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 530 | 75.05 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 540 | 75.07 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 547 | 75.07 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 11 |
| 550 | 75.08 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 561 | 75.09 | wind | 3.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 579 | 75.10 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 604 | 75.13 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 616 | 75.14 | wind | 1.0 | 14400 | < th | dose dependent | no | NA | NA |
| 631 | 75.15 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 21 |
| 632 | 75.16 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 694 | 75.19 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 735 | 75.23 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 745 | 75.24 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 757 | 75.25 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 781 | 75.27 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 9 |
| 808 | 75.28 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 11 |
| 818 | 75.29 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 857 | 75.31 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 868 | 75.32 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 19 |
| 881 | 75.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 902 | 75.34 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 923 | 75.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 976 | 75.38 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 988 | 75.38 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 997 | 75.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |