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Os02g0312500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Optic atrophy 3 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.53 (0.0136) R2 : 0.0047
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0422 (0.0287) R2dN8 : 0.00607 R2N8 : 0.0047
σ : 0.257
deviance : 30.31
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.79 0.219 9.53 0.00567 0.332 0.263 -0.222 -0.714 0.0947 17 9.972 1441 -- --
22.67 0.222 9.53 0.00101 0.335 0.262 -0.235 -- 0.0937 17 9.999 1431 -- --
21.91 0.218 9.53 0.00432 0.331 0.262 -- -0.711 0.0939 16.8 9.974 1440 -- --
22.78 0.222 9.52 -0.00681 0.328 0.266 -- -- 0.0895 16.9 9.999 1425 -- --
27.49 0.244 9.53 0.00576 -- 0.26 -- -0.627 0.0941 -- 8.975 1381 -- --
24.44 0.232 9.53 0.0224 0.332 -- -0.197 -- 0.0527 17 -- -- -- --
24.53 0.232 9.53 0.0222 0.331 -- -- -- 0.0518 16.9 -- -- -- --
28.1 0.247 9.52 -0.00886 -- 0.273 -- -- 0.0858 -- 47.67 1390 -- --
22.76 0.222 9.52 -- 0.328 0.262 -- -- 0.09 17 9.994 1407 -- --
30.3 0.257 9.53 0.01 -- -- -- -- 0.0433 -- -- -- -- --
24.55 0.232 9.53 -- 0.33 -- -- -- 0.0493 16.9 -- -- -- --
28.08 0.247 9.52 -- -- 0.281 -- -- 0.0824 -- 47.66 1390 -- --
30.31 0.257 9.53 -- -- -- -- -- 0.0422 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.07 radiation 20.0 1440 < th dose independent rect. 11 1
2 21.22 wind 9.0 43200 < th dose independent rect. 10 4
3 21.25 wind 9.0 43200 > th dose independent rect. 10 4
4 21.25 wind 7.0 43200 < th dose dependent rect. 1 1
8 21.38 wind 7.0 43200 > th dose dependent rect. 10 4
9 21.38 precipitation 0.1 43200 > th dose dependent rect. 19 5
11 21.40 precipitation 0.1 43200 > th dose dependent rect. 19 3
13 21.42 wind 9.0 43200 > th dose independent rect. 11 1
18 21.46 radiation 10.0 1440 < th dose independent rect. 15 18
21 21.47 wind 1.0 43200 > th dose dependent rect. 1 1
22 21.47 wind 7.0 43200 > th dose dependent rect. 11 2
25 21.49 precipitation 0.1 43200 > th dose dependent rect. 16 1
26 21.50 radiation 10.0 1440 < th dose independent sin 13 NA
27 21.50 radiation 10.0 1440 < th dose independent rect. 16 1
28 21.50 radiation 30.0 1440 < th dose dependent rect. 11 1
31 21.52 humidity 90.0 14400 > th dose independent rect. 13 1
33 21.53 wind 9.0 43200 < th dose independent rect. 11 1
34 21.53 precipitation 0.1 43200 > th dose independent rect. 19 5
35 21.53 precipitation 0.1 43200 < th dose independent rect. 19 5
39 21.53 precipitation 0.1 43200 < th dose dependent rect. 19 5
40 21.53 precipitation 0.1 43200 > th dose dependent rect. 16 8
50 21.57 precipitation 0.1 43200 > th dose independent rect. 16 4
51 21.57 precipitation 0.1 43200 < th dose independent rect. 16 4
52 21.57 precipitation 0.1 43200 < th dose dependent rect. 16 4
64 21.59 precipitation 0.1 43200 > th dose dependent rect. 13 11
66 21.60 precipitation 0.1 43200 > th dose independent rect. 16 1
75 21.61 precipitation 0.1 43200 > th dose independent rect. 22 1
77 21.61 radiation 30.0 4320 < th dose independent rect. 16 16
79 21.61 precipitation 0.1 43200 > th dose dependent rect. 22 1
84 21.62 precipitation 0.1 43200 < th dose independent rect. 16 1
85 21.62 precipitation 0.1 43200 < th dose independent rect. 19 3
87 21.62 precipitation 0.1 43200 < th dose independent rect. 17 7
88 21.62 precipitation 0.1 43200 > th dose independent rect. 16 8
94 21.62 precipitation 0.1 43200 < th dose dependent rect. 16 1
95 21.62 precipitation 0.1 43200 < th dose dependent rect. 19 3
96 21.62 precipitation 0.1 43200 < th dose dependent rect. 17 7
99 21.63 radiation 10.0 43200 > th dose independent rect. 7 3
100 21.63 precipitation 0.1 43200 > th dose independent rect. 19 3
107 21.63 wind 9.0 43200 > th dose independent rect. 4 12
112 21.63 wind 9.0 43200 > th dose dependent rect. 10 6
114 21.64 radiation 10.0 43200 > th dose independent sin 7 NA
116 21.64 radiation 30.0 14400 > th dose independent rect. 7 1
117 21.64 precipitation 0.1 43200 < th dose independent rect. 22 1
146 21.64 precipitation 0.1 43200 < th dose dependent rect. 22 1
153 21.65 wind 9.0 43200 < th dose independent rect. 4 12
166 21.66 radiation 10.0 43200 > th dose independent rect. 6 8
214 21.68 radiation 10.0 43200 > th dose independent rect. 13 1
227 21.68 wind 9.0 43200 > th dose dependent rect. 15 1
247 21.70 wind 1.0 43200 > th dose independent rect. 2 1
254 21.70 radiation 10.0 1440 < th dose independent rect. 15 12
259 21.70 wind 9.0 43200 > th dose independent rect. 21 19
263 21.71 precipitation 0.1 43200 > th dose independent rect. 21 3
264 21.71 radiation 10.0 1440 < th dose independent rect. 15 4
271 21.71 radiation 10.0 1440 < th dose independent rect. 15 10
276 21.71 wind 9.0 43200 < th dose independent rect. 21 19
281 21.71 wind 9.0 43200 < th dose dependent rect. 22 6
325 21.72 precipitation 0.1 43200 > th dose dependent sin 17 NA
351 21.73 wind 7.0 43200 < th dose dependent rect. 22 8
381 21.74 humidity 70.0 1440 < th dose independent rect. 16 21
394 21.75 radiation 20.0 43200 > th dose independent rect. 11 2
402 21.75 wind 1.0 43200 < th dose independent rect. 22 9
421 21.75 radiation 20.0 1440 < th dose dependent rect. 16 21
424 21.76 wind 9.0 43200 > th dose independent rect. 15 2
444 21.77 radiation 10.0 4320 > th dose independent rect. 6 2
448 21.77 radiation 20.0 1440 < th dose independent rect. 6 7
457 21.77 radiation 20.0 1440 < th dose independent rect. 2 11
501 21.78 radiation 10.0 1440 < th dose independent rect. 5 13
505 21.78 radiation 10.0 1440 < th dose independent rect. 5 20
520 21.79 radiation 10.0 1440 < th dose independent no NA NA
555 21.79 radiation 10.0 1440 < th dose independent rect. 2 16
599 21.79 radiation 20.0 43200 < th dose dependent rect. 9 4
608 21.80 wind 9.0 43200 > th dose independent sin 1 NA
660 21.80 wind 1.0 43200 > th dose dependent rect. 22 6
672 21.81 wind 9.0 43200 < th dose independent sin 1 NA
687 21.81 humidity 70.0 1440 > th dose independent rect. 17 20
696 21.81 wind 1.0 43200 > th dose dependent rect. 22 8
702 21.82 radiation 20.0 1440 < th dose independent sin 3 NA
703 21.82 precipitation 0.1 43200 < th dose independent rect. 20 1
720 21.82 radiation 10.0 4320 > th dose dependent rect. 7 1
721 21.82 precipitation 0.1 43200 < th dose dependent rect. 20 1
733 21.83 precipitation 0.1 43200 > th dose independent rect. 20 1
848 21.84 radiation 20.0 1440 < th dose independent rect. 8 4
854 21.84 precipitation 0.1 14400 > th dose independent rect. 5 11
933 21.85 radiation 1.0 1440 > th dose dependent rect. 11 1