Os02g0299600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1242 family protein.
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Os02g0299600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1242 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.8 | 0.474 | 6.42 | 0.145 | 0.543 | -3.23 | 0.937 | 0.235 | -0.499 | 18.7 | 30.24 | 230 | -- | -- |
| 101.79 | 0.47 | 6.41 | 0.184 | 0.552 | -3.23 | 0.901 | -- | -0.489 | 18.8 | 30.21 | 220 | -- | -- |
| 103.74 | 0.474 | 6.41 | 0.2 | 0.541 | -3.26 | -- | -0.121 | -0.469 | 18.6 | 30.52 | 226 | -- | -- |
| 103.75 | 0.474 | 6.41 | 0.173 | 0.55 | -3.26 | -- | -- | -0.472 | 18.6 | 30.58 | 219 | -- | -- |
| 113.8 | 0.497 | 6.41 | 0.0731 | -- | -3.75 | -- | -0.0967 | -0.552 | -- | 30.99 | 279 | -- | -- |
| 236.77 | 0.721 | 6.29 | 0.973 | 1.49 | -- | 1.05 | -- | 0.135 | 17 | -- | -- | -- | -- |
| 239.55 | 0.725 | 6.28 | 0.975 | 1.49 | -- | -- | -- | 0.14 | 17 | -- | -- | -- | -- |
| 113.82 | 0.497 | 6.41 | 0.0628 | -- | -3.74 | -- | -- | -0.545 | -- | 31.05 | 277 | -- | -- |
| 104.44 | 0.476 | 6.42 | -- | 0.521 | -3.33 | -- | -- | -0.505 | 18.7 | 30.53 | 226 | -- | -- |
| 356.61 | 0.882 | 6.27 | 0.921 | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
| 264.6 | 0.761 | 6.31 | -- | 1.47 | -- | -- | -- | 0.0313 | 17 | -- | -- | -- | -- |
| 113.92 | 0.497 | 6.41 | -- | -- | -3.76 | -- | -- | -0.555 | -- | 31.04 | 275 | -- | -- |
| 378.96 | 0.909 | 6.29 | -- | -- | -- | -- | -- | -0.00055 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 9 | 100.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 14 | 101.65 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 18 | 102.49 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 19 | 103.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 21 | 103.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 22 | 103.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 24 | 103.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 25 | 103.41 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 29 | 103.51 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 33 | 103.59 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 35 | 103.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 49 | 103.79 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 65 | 104.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 21 |
| 73 | 104.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 22 |
| 101 | 104.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 22 |
| 103 | 104.23 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 119 | 104.26 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 10 |
| 120 | 104.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 124 | 104.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 17 |
| 126 | 104.27 | temperature | 15 | 1440 | > th | dose dependent | rect. | 10 | 19 |
| 162 | 104.37 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 174 | 104.40 | temperature | 15 | 1440 | > th | dose dependent | sin | 15 | NA |
| 273 | 104.60 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 317 | 104.72 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 333 | 104.75 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 338 | 104.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 637 | 105.31 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 933 | 105.97 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 1 |