Os02g0296300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0296300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 200.8 | 0.666 | 7.19 | 0.673 | 1.03 | 1.47 | 0.949 | 0.825 | -0.394 | 9.64 | 22.2 | 1500 | -- | -- |
| 202.52 | 0.663 | 7.16 | 0.907 | 1.04 | 1.44 | 0.959 | -- | -0.369 | 9.7 | 22.2 | 1505 | -- | -- |
| 204.17 | 0.666 | 7.19 | 0.706 | 1.03 | 1.47 | -- | 0.838 | -0.395 | 9.61 | 22.13 | 1500 | -- | -- |
| 205.82 | 0.668 | 7.16 | 0.974 | 1.03 | 1.46 | -- | -- | -0.33 | 9.61 | 22.2 | 1500 | -- | -- |
| 247.8 | 0.733 | 7.22 | 0.546 | -- | 1.43 | -- | 1.05 | -0.4 | -- | 22.3 | 801 | -- | -- |
| 279.6 | 0.784 | 7.27 | 0.402 | 1.04 | -- | 0.891 | -- | -0.812 | 9.82 | -- | -- | -- | -- |
| 282.65 | 0.787 | 7.27 | 0.436 | 1.03 | -- | -- | -- | -0.81 | 9.8 | -- | -- | -- | -- |
| 249.82 | 0.736 | 7.19 | 0.895 | -- | 1.43 | -- | -- | -0.326 | -- | 22.3 | 795 | -- | -- |
| 227.32 | 0.702 | 7.19 | -- | 1.02 | 1.24 | -- | -- | -0.464 | 9.52 | 22.3 | 1454 | -- | -- |
| 346.13 | 0.869 | 7.29 | 0.426 | -- | -- | -- | -- | -0.809 | -- | -- | -- | -- | -- |
| 287.65 | 0.793 | 7.28 | -- | 1.03 | -- | -- | -- | -0.859 | 9.77 | -- | -- | -- | -- |
| 269.52 | 0.765 | 7.2 | -- | -- | 1.26 | -- | -- | -0.453 | -- | 22.3 | 787 | -- | -- |
| 350.91 | 0.874 | 7.31 | -- | -- | -- | -- | -- | -0.856 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 20 | 206.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 27 | 206.43 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 29 | 206.46 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 103 | 208.14 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 110 | 208.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 115 | 208.36 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 130 | 208.48 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 172 | 208.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 20 |
| 182 | 208.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 185 | 209.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 186 | 209.01 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 191 | 209.01 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 223 | 209.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 256 | 209.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 267 | 209.39 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 281 | 209.44 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 316 | 209.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 321 | 209.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 328 | 209.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 432 | 209.87 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 488 | 209.96 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 545 | 210.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 574 | 210.18 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 612 | 210.29 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 742 | 210.62 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 763 | 210.69 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 890 | 210.99 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 914 | 211.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |