Os02g0286600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os02g0286600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.17 | 0.55 | 2.91 | -0.117 | 0.107 | 0.774 | -0.356 | -2.56 | 0.103 | 5.52 | 56 | 318 | -- | -- |
| 139.29 | 0.554 | 2.9 | -0.00982 | 0.058 | 0.381 | -0.251 | -- | 0.0868 | 5.03 | 56 | 318 | -- | -- |
| 137.38 | 0.546 | 2.91 | -0.11 | 0.115 | 0.808 | -- | -2.39 | 0.0998 | 5.85 | 55.86 | 294 | -- | -- |
| 138.46 | 0.552 | 2.9 | -0.00422 | 0.0654 | 0.47 | -- | -- | 0.0911 | 3.78 | 56 | 302 | -- | -- |
| 137.74 | 0.547 | 2.92 | -0.115 | -- | 0.803 | -- | -2.58 | 0.101 | -- | 54.92 | 296 | -- | -- |
| 143.16 | 0.561 | 2.91 | -0.0023 | 0.00528 | -- | 0.406 | -- | 0.0537 | 17.9 | -- | -- | -- | -- |
| 143.51 | 0.561 | 2.91 | -0.00451 | 0.0304 | -- | -- | -- | 0.0556 | 12.8 | -- | -- | -- | -- |
| 138.68 | 0.551 | 2.9 | -0.00175 | -- | 0.442 | -- | -- | 0.0906 | -- | 56 | 302 | -- | -- |
| 138.46 | 0.551 | 2.9 | -- | 0.0653 | 0.47 | -- | -- | 0.0916 | 3.78 | 56 | 302 | -- | -- |
| 143.57 | 0.56 | 2.91 | -0.00562 | -- | -- | -- | -- | 0.0551 | -- | -- | -- | -- | -- |
| 143.51 | 0.56 | 2.91 | -- | 0.0305 | -- | -- | -- | 0.0561 | 12.8 | -- | -- | -- | -- |
| 138.68 | 0.55 | 2.9 | -- | -- | 0.443 | -- | -- | 0.0908 | -- | 56 | 302 | -- | -- |
| 143.57 | 0.559 | 2.91 | -- | -- | -- | -- | -- | 0.0557 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.73 | humidity | 60.0 | 30 | < th | dose independent | rect. | 17 | 1 |
| 18 | 121.91 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 17 | 1 |
| 238 | 128.98 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 254 | 129.53 | wind | 3.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 261 | 129.95 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 1 |
| 262 | 129.95 | wind | 5.0 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 263 | 129.95 | wind | 7.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 350 | 130.51 | wind | 7.0 | 90 | > th | dose independent | rect. | 2 | 6 |
| 403 | 131.79 | temperature | 30.0 | 30 | > th | dose independent | rect. | 17 | 1 |
| 424 | 132.76 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 445 | 133.12 | wind | 7.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 456 | 133.13 | wind | 7.0 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 569 | 133.40 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 2 |
| 577 | 133.58 | wind | 7.0 | 90 | > th | dose independent | rect. | 24 | 8 |
| 593 | 133.93 | wind | 5.0 | 90 | > th | dose dependent | rect. | 24 | 8 |
| 621 | 134.16 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 1 |
| 625 | 134.16 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 658 | 134.50 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 685 | 134.67 | humidity | 60.0 | 10 | > th | dose independent | rect. | 12 | 14 |
| 711 | 134.96 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 719 | 135.00 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 1 |
| 748 | 135.21 | humidity | 60.0 | 10 | < th | dose independent | sin | 11 | NA |
| 753 | 135.24 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 24 | 4 |
| 758 | 135.25 | wind | 7.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 760 | 135.25 | wind | 5.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 769 | 135.33 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 784 | 135.38 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 797 | 135.47 | temperature | 20.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 810 | 135.63 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 14 |
| 832 | 135.73 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 4 |
| 872 | 135.90 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 5 |
| 892 | 135.90 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 5 |
| 917 | 135.91 | humidity | 60.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 922 | 135.93 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 923 | 135.94 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 991 | 136.28 | humidity | 60.0 | 10 | > th | dose independent | sin | 11 | NA |