Os02g0280100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Micro-fibrillar-associated 1, C-terminal family protein.
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Os02g0280100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Micro-fibrillar-associated 1, C-terminal family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.04 | 0.364 | 10.6 | 0.478 | 0.406 | -0.318 | -0.35 | 0.147 | -0.206 | 6.82 | 1015 | 4760 | -- | -- |
| 60.14 | 0.361 | 10.6 | 0.472 | 0.407 | -0.304 | -0.366 | -- | -0.203 | 6.81 | 1015 | 4916 | -- | -- |
| 60.32 | 0.362 | 10.6 | 0.471 | 0.404 | -0.312 | -- | 0.124 | -0.204 | 7.04 | 1014 | 4848 | -- | -- |
| 60.38 | 0.362 | 10.6 | 0.447 | 0.402 | -0.299 | -- | -- | -0.211 | 7.04 | 1015 | 4907 | -- | -- |
| 68.82 | 0.386 | 10.7 | 0.486 | -- | -0.291 | -- | 0.113 | -0.198 | -- | 1014 | 5062 | -- | -- |
| 63.49 | 0.374 | 10.7 | 0.422 | 0.396 | -- | -0.3 | -- | -0.261 | 6.88 | -- | -- | -- | -- |
| 63.7 | 0.374 | 10.7 | 0.417 | 0.395 | -- | -- | -- | -0.26 | 7.06 | -- | -- | -- | -- |
| 68.78 | 0.386 | 10.7 | 0.512 | -- | -0.293 | -- | -- | -0.201 | -- | 1013 | 4956 | -- | -- |
| 65.24 | 0.376 | 10.7 | -- | 0.412 | -0.323 | -- | -- | -0.265 | 6.93 | 1014 | 4234 | -- | -- |
| 71.92 | 0.396 | 10.7 | 0.425 | -- | -- | -- | -- | -0.252 | -- | -- | -- | -- | -- |
| 68.28 | 0.387 | 10.7 | -- | 0.399 | -- | -- | -- | -0.306 | 7 | -- | -- | -- | -- |
| 74.13 | 0.401 | 10.7 | -- | -- | -0.281 | -- | -- | -0.258 | -- | 1014 | 4597 | -- | -- |
| 76.68 | 0.409 | 10.7 | -- | -- | -- | -- | -- | -0.3 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.19 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 13 |
| 11 | 57.37 | temperature | 30.0 | 720 | > th | dose independent | rect. | 11 | 1 |
| 14 | 57.42 | temperature | 30.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 15 | 57.49 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 16 | 57.68 | temperature | 25.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 17 | 57.76 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 10 |
| 22 | 57.91 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 10 |
| 24 | 57.95 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 33 | 58.06 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 45 | 58.35 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 50 | 58.38 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 51 | 58.38 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 54 | 58.42 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 65 | 58.49 | temperature | 25.0 | 30 | > th | dose independent | rect. | 18 | 10 |
| 68 | 58.50 | temperature | 25.0 | 30 | > th | dose independent | rect. | 18 | 5 |
| 69 | 58.50 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 74 | 58.53 | temperature | 25.0 | 30 | > th | dose independent | rect. | 18 | 8 |
| 94 | 58.67 | temperature | 30.0 | 720 | > th | dose independent | rect. | 11 | 3 |
| 97 | 58.71 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 102 | 58.73 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 104 | 58.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 107 | 58.73 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 111 | 58.73 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 120 | 58.73 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 121 | 58.73 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 122 | 58.73 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 132 | 58.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 135 | 58.75 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 142 | 58.80 | temperature | 30.0 | 30 | > th | dose independent | rect. | 9 | 3 |
| 163 | 58.84 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 164 | 58.85 | temperature | 25.0 | 30 | > th | dose dependent | sin | 11 | NA |
| 168 | 58.88 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 198 | 58.94 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 202 | 58.96 | temperature | 30.0 | 30 | > th | dose independent | sin | 7 | NA |
| 204 | 58.96 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 209 | 58.98 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 211 | 58.99 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 232 | 59.03 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 234 | 59.04 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 313 | 59.12 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 5 | NA |
| 337 | 59.15 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 343 | 59.15 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 345 | 59.16 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 414 | 59.19 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 416 | 59.20 | temperature | 30.0 | 30 | < th | dose independent | sin | 4 | NA |
| 417 | 59.20 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 425 | 59.21 | temperature | 30.0 | 720 | > th | dose independent | sin | 6 | NA |
| 426 | 59.21 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 431 | 59.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 437 | 59.23 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 442 | 59.24 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 443 | 59.24 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 445 | 59.24 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 451 | 59.25 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 452 | 59.25 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 454 | 59.25 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 461 | 59.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 464 | 59.26 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 469 | 59.26 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 471 | 59.26 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 477 | 59.26 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 478 | 59.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 480 | 59.26 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 502 | 59.28 | humidity | 60.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 527 | 59.29 | humidity | 60.0 | 14400 | < th | dose dependent | no | NA | NA |
| 638 | 59.30 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 639 | 59.30 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 657 | 59.30 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 663 | 59.31 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 665 | 59.32 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 669 | 59.32 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 670 | 59.32 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 733 | 59.37 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 773 | 59.41 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 777 | 59.41 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 18 | 2 |
| 785 | 59.43 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 17 |
| 790 | 59.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 797 | 59.45 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 821 | 59.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 857 | 59.48 | temperature | 30.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 858 | 59.48 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 880 | 59.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 882 | 59.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 885 | 59.51 | humidity | 60.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 904 | 59.51 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 952 | 59.53 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 10 | 2 |