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Os02g0273100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Aminotransferase, class IV family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.87 (0.0441) R2 : 0.667
β1 : -1.97 (0.162) R2dD : 0.113 R2D : -0.00388
β2 : -- (--) R2dC : -- R2C : --
β3 : -3.47 (0.128) R2dE : 0.566 R2E : 0.447
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.17 (0.0947) R2dN8 : 0.152 R2N8 : 0.0216
σ : 0.825
deviance : 313.72
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C
peak time of C : --
E
wheather : temperature
threshold : 80.01
memory length : 1013
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 20.2
open length of G : 14.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
284.64 0.793 6.92 -2.03 3.7 -2.53 -2.1 0.38 -1.14 23.7 28.71 247 17.2 7.87
284.77 0.786 6.92 -2.01 3.68 -2.53 -2.01 -- -1.14 23.7 28.59 239 17.4 7.78
295.59 0.801 6.91 -1.75 3.71 -2.45 -- -0.915 -1.06 23.8 29.58 242 17.6 8.17
299.32 0.806 6.91 -1.89 3.59 -2.3 -- -- -1.1 23.7 28.38 194 17.8 7.38
352.94 0.875 6.89 -1.93 -- -4.01 -- -1.48 -1.45 -- 49.87 925 21.8 13.5
334.04 0.857 6.85 -1.72 2.8 -- -1.41 -- -0.912 23.7 -- -- -- --
342.64 0.867 6.85 -1.66 2.81 -- -- -- -0.906 23.7 -- -- -- --
313.72 0.825 6.87 -1.97 -- -3.47 -- -- -1.17 -- 80.01 1013 20.2 14.4
389.36 0.919 6.84 -- 3.4 -1.66 -- -- -0.832 23.6 29.27 162 18.5 6.62
838.13 1.35 6.78 -1.58 -- -- -- -- -0.872 -- -- -- -- --
415.48 0.953 6.8 -- 2.79 -- -- -- -0.72 23.7 -- -- -- --
404.59 0.937 6.78 -- -- -3.07 -- -- -0.806 -- 125.5 975 20.6 14
904.14 1.4 6.74 -- -- -- -- -- -0.696 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 285.22 temperature 30 270 < th dose dependent rect. 17 8
3 286.29 temperature 25 270 < th dose dependent rect. 12 12
9 287.18 atmosphere 1000 90 > th dose dependent rect. 19 7
17 287.83 humidity 70 14400 < th dose dependent rect. 21 1
26 287.98 atmosphere 995 270 > th dose dependent rect. 17 9
34 288.40 wind 7 43200 > th dose dependent rect. 23 2
40 288.86 atmosphere 1015 270 < th dose dependent rect. 14 17
47 289.10 humidity 60 14400 < th dose independent rect. 6 1
49 289.10 humidity 60 14400 < th dose independent rect. 20 1
51 289.10 radiation 20 14400 > th dose independent rect. 17 1
102 289.10 humidity 60 14400 < th dose dependent rect. 6 1
106 289.10 radiation 20 14400 > th dose dependent rect. 17 1
166 289.44 wind 9 43200 > th dose independent rect. 22 2
175 289.66 atmosphere 995 43200 < th dose dependent rect. 3 12
189 290.02 temperature 25 10 < th dose dependent rect. 13 13
202 290.40 atmosphere 995 43200 < th dose independent rect. 5 9
229 290.66 wind 9 43200 < th dose independent rect. 22 2
259 291.16 wind 1 14400 < th dose independent rect. 5 19
262 291.25 wind 7 43200 > th dose dependent rect. 21 13
267 291.37 wind 7 43200 > th dose independent rect. 7 2
280 291.71 temperature 25 270 < th dose dependent sin 18 NA
284 291.79 temperature 20 90 < th dose independent rect. 13 12
297 292.21 wind 9 43200 > th dose independent rect. 22 6
300 292.27 humidity 60 14400 > th dose independent rect. 21 11
302 292.28 radiation 1 1440 > th dose independent rect. 10 3
305 292.32 atmosphere 995 43200 > th dose independent rect. 5 9
306 292.37 radiation 1 1440 > th dose independent rect. 12 2
312 292.45 humidity 60 14400 > th dose independent rect. 7 1
317 292.50 wind 9 43200 > th dose dependent rect. 21 3
321 292.54 wind 1 14400 < th dose dependent rect. 5 19
323 292.58 temperature 20 90 > th dose independent rect. 15 18
324 292.62 atmosphere 1015 10 < th dose dependent rect. 16 17
328 292.67 atmosphere 995 270 > th dose dependent rect. 9 15
335 292.77 atmosphere 995 43200 < th dose dependent sin 3 NA
344 292.96 wind 1 14400 > th dose independent rect. 5 19
353 293.05 wind 7 43200 < th dose independent rect. 7 2
358 293.11 wind 7 43200 > th dose dependent rect. 9 1
409 293.90 wind 9 43200 > th dose dependent rect. 21 7
427 294.05 atmosphere 1005 720 > th dose dependent rect. 10 14
449 294.21 wind 1 14400 < th dose independent rect. 7 21
464 294.35 atmosphere 1005 720 > th dose dependent rect. 19 1
480 294.52 wind 3 14400 < th dose dependent rect. 22 1
483 294.55 atmosphere 1005 720 > th dose dependent rect. 11 11
486 294.58 atmosphere 995 43200 < th dose dependent rect. 4 7
496 294.67 atmosphere 995 270 > th dose dependent sin 16 NA
500 294.69 wind 1 14400 < th dose dependent rect. 7 17
501 294.70 atmosphere 995 43200 > th dose independent rect. 6 5
505 294.76 wind 1 14400 < th dose independent rect. 5 22
519 294.84 radiation 1 1440 < th dose independent rect. 13 1
520 294.84 radiation 1 1440 < th dose dependent rect. 13 1
530 294.90 wind 9 43200 < th dose independent rect. 21 13
546 295.00 wind 1 14400 < th dose independent sin 23 NA
597 295.39 humidity 90 270 < th dose independent rect. 6 8
600 295.40 atmosphere 1005 720 > th dose dependent sin 19 NA
628 295.61 temperature 20 270 > th dose independent rect. 12 9
666 295.88 wind 9 43200 > th dose independent rect. 21 14
693 296.07 humidity 50 4320 > th dose independent rect. 3 10
699 296.11 temperature 20 90 < th dose independent rect. 17 8
703 296.11 atmosphere 995 43200 < th dose dependent rect. 3 21
714 296.17 atmosphere 995 43200 < th dose dependent rect. 7 19
732 296.31 wind 1 14400 < th dose independent rect. 7 12
742 296.35 atmosphere 1015 270 < th dose dependent sin 15 NA
761 296.46 humidity 50 4320 > th dose independent rect. 18 19
771 296.55 humidity 90 14400 < th dose dependent rect. 22 5
776 296.60 wind 9 43200 < th dose independent rect. 22 6
781 296.64 humidity 50 4320 > th dose independent rect. 6 7
796 296.70 wind 1 14400 < th dose dependent rect. 7 21
844 296.87 humidity 50 4320 > th dose independent rect. 8 5
846 296.88 wind 1 14400 < th dose dependent sin 22 NA
863 296.97 wind 1 14400 > th dose independent sin 23 NA
867 296.99 wind 1 14400 > th dose independent rect. 5 14
869 297.00 wind 1 14400 < th dose independent rect. 7 7
871 297.00 temperature 20 1440 < th dose dependent rect. 2 1
876 297.01 atmosphere 1005 10 > th dose dependent rect. 12 15
884 297.05 wind 1 14400 < th dose dependent rect. 5 22
903 297.15 temperature 15 270 > th dose dependent sin 16 NA
942 297.33 humidity 50 4320 > th dose independent rect. 11 2
951 297.36 humidity 50 4320 > th dose independent rect. 22 15