Os02g0272800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0272800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.04 | 0.415 | 7.61 | 0.273 | 1.4 | 0.405 | 0.748 | 1.26 | 0.747 | 5.21 | 21 | 31 | -- | -- |
| 83.04 | 0.424 | 7.66 | -0.0596 | 1.46 | 0.455 | 0.232 | -- | 0.603 | 5.55 | 21.43 | 471 | -- | -- |
| 79.3 | 0.418 | 7.62 | 0.245 | 1.41 | 0.393 | -- | 1.11 | 0.738 | 5.22 | 21 | 31 | -- | -- |
| 83 | 0.424 | 7.65 | -0.0689 | 1.44 | 0.478 | -- | -- | 0.631 | 5.61 | 21.5 | 474 | -- | -- |
| 178.2 | 0.622 | 7.62 | 0.398 | -- | 0.16 | -- | 1.08 | 0.824 | -- | 22.6 | 44 | -- | -- |
| 92.66 | 0.451 | 7.62 | 0.0861 | 1.35 | -- | 0.229 | -- | 0.765 | 5.56 | -- | -- | -- | -- |
| 92.78 | 0.451 | 7.62 | 0.0869 | 1.35 | -- | -- | -- | 0.764 | 5.54 | -- | -- | -- | -- |
| 133.92 | 0.539 | 7.61 | 0.323 | -- | -1.07 | -- | -- | 0.936 | -- | 28.18 | 438 | -- | -- |
| 83.14 | 0.425 | 7.65 | -- | 1.43 | 0.469 | -- | -- | 0.634 | 5.62 | 21.4 | 474 | -- | -- |
| 187.69 | 0.64 | 7.64 | 0.131 | -- | -- | -- | -- | 0.797 | -- | -- | -- | -- | -- |
| 92.98 | 0.451 | 7.62 | -- | 1.35 | -- | -- | -- | 0.755 | 5.54 | -- | -- | -- | -- |
| 136.63 | 0.544 | 7.62 | -- | -- | -1.03 | -- | -- | 0.9 | -- | 28.2 | 436 | -- | -- |
| 188.14 | 0.64 | 7.64 | -- | -- | -- | -- | -- | 0.783 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.78 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 2 | 74.14 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 12 | 75.44 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 13 | 75.48 | wind | 3 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 19 | 75.61 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 16 |
| 33 | 75.79 | wind | 3 | 14400 | < th | dose dependent | sin | 11 | NA |
| 73 | 76.20 | wind | 1 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 94 | 76.37 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 115 | 76.51 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 121 | 76.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 170 | 76.87 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 176 | 76.91 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 210 | 77.10 | wind | 1 | 14400 | > th | dose independent | no | NA | NA |
| 251 | 77.40 | wind | 1 | 14400 | < th | dose independent | rect. | 9 | 22 |
| 255 | 77.42 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 277 | 77.55 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 302 | 77.67 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 307 | 77.68 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 8 |
| 312 | 77.71 | wind | 1 | 14400 | < th | dose independent | no | NA | NA |
| 336 | 77.83 | wind | 3 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 340 | 77.85 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 20 |
| 342 | 77.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 9 |
| 367 | 77.93 | wind | 1 | 14400 | > th | dose independent | sin | 13 | NA |
| 395 | 78.04 | temperature | 25 | 10 | < th | dose dependent | sin | 8 | NA |
| 422 | 78.12 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 443 | 78.18 | wind | 1 | 14400 | > th | dose independent | sin | 3 | NA |
| 444 | 78.18 | wind | 1 | 14400 | < th | dose independent | sin | 13 | NA |
| 497 | 78.33 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 532 | 78.46 | temperature | 25 | 270 | < th | dose dependent | sin | 11 | NA |
| 547 | 78.51 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 605 | 78.66 | wind | 3 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 642 | 78.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 10 |
| 697 | 78.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 701 | 78.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 19 |
| 718 | 78.98 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 769 | 79.08 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 799 | 79.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 815 | 79.15 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 825 | 79.17 | wind | 1 | 14400 | < th | dose independent | sin | 2 | NA |
| 891 | 79.28 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 898 | 79.28 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 21 |
| 920 | 79.32 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 958 | 79.37 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 12 |
| 981 | 79.43 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 10 |