Os02g0272400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0272400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.8 | 0.181 | 8.84 | 0.125 | 0.0868 | -0.0744 | -0.217 | 3.08 | -0.054 | 8.81 | 30.25 | 728 | -- | -- |
| 15.06 | 0.181 | 8.87 | -0.148 | 0.092 | 0.27 | -0.244 | -- | -0.0552 | 8.27 | 29.5 | 706 | -- | -- |
| 14.95 | 0.18 | 8.84 | 0.147 | 0.0891 | -0.0922 | -- | 3.33 | -0.0529 | 9.13 | 30.09 | 733 | -- | -- |
| 15.21 | 0.182 | 8.87 | -0.156 | 0.0931 | 0.277 | -- | -- | -0.0537 | 9.47 | 29.79 | 715 | -- | -- |
| 15.36 | 0.183 | 8.84 | 0.137 | -- | -0.107 | -- | 3.08 | -0.0523 | -- | 30.05 | 746 | -- | -- |
| 16.52 | 0.191 | 8.88 | -0.109 | 0.0117 | -- | -0.431 | -- | -0.0809 | 7.37 | -- | -- | -- | -- |
| 16.88 | 0.192 | 8.88 | -0.117 | 0.0489 | -- | -- | -- | -0.0791 | 12.8 | -- | -- | -- | -- |
| 15.64 | 0.184 | 8.87 | -0.154 | -- | 0.228 | -- | -- | -0.0555 | -- | 30.7 | 734 | -- | -- |
| 15.82 | 0.185 | 8.87 | -- | 0.0851 | 0.248 | -- | -- | -0.0412 | 9.57 | 30.64 | 708 | -- | -- |
| 17.03 | 0.193 | 8.88 | -0.119 | -- | -- | -- | -- | -0.08 | -- | -- | -- | -- | -- |
| 17.24 | 0.194 | 8.88 | -- | 0.0508 | -- | -- | -- | -0.0661 | 12.9 | -- | -- | -- | -- |
| 16.22 | 0.188 | 8.87 | -- | -- | 0.213 | -- | -- | -0.0434 | -- | 31.01 | 715 | -- | -- |
| 17.4 | 0.195 | 8.88 | -- | -- | -- | -- | -- | -0.0668 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.21 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 2 | 14.25 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 3 | 14.28 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 2 | 4 |
| 5 | 14.29 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 6 | 14.29 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 4 |
| 9 | 14.31 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 13 | 14.35 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 15 | 14.35 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 19 | 14.36 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 20 | 14.37 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 23 | 14.37 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 35 | 14.42 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 37 | 14.42 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 90 | 14.52 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 6 |
| 96 | 14.53 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 11 |
| 107 | 14.55 | temperature | 20.0 | 90 | > th | dose dependent | sin | 13 | NA |
| 138 | 14.58 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 224 | 14.66 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 7 |
| 238 | 14.67 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 274 | 14.70 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 288 | 14.71 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 296 | 14.71 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 17 |
| 308 | 14.72 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 316 | 14.73 | temperature | 30.0 | 90 | < th | dose dependent | sin | 14 | NA |
| 318 | 14.73 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 13 | 2 |
| 394 | 14.77 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 395 | 14.77 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 401 | 14.77 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 431 | 14.78 | temperature | 30.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 432 | 14.78 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 490 | 14.79 | temperature | 30.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 547 | 14.80 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 554 | 14.80 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 609 | 14.81 | temperature | 30.0 | 720 | > th | dose dependent | no | NA | NA |
| 718 | 14.82 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 756 | 14.82 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 774 | 14.83 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 14 | 21 |
| 817 | 14.85 | temperature | 30.0 | 720 | < th | dose independent | rect. | 10 | 10 |
| 851 | 14.86 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 853 | 14.86 | radiation | 20.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 908 | 14.87 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 919 | 14.87 | wind | 5.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 922 | 14.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 952 | 14.88 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 962 | 14.88 | temperature | 30.0 | 720 | > th | dose independent | rect. | 11 | 7 |
| 970 | 14.88 | temperature | 30.0 | 720 | > th | dose independent | rect. | 16 | 22 |
| 971 | 14.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 22 |