Os02g0264800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1070 family protein.
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Os02g0264800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1070 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 543.4 | 1.1 | 6.31 | -4.49 | 3.17 | 2.55 | -2.14 | -0.703 | -1.07 | 12.5 | 79.98 | 1186 | -- | -- |
| 543.68 | 1.09 | 6.3 | -4.43 | 3.21 | 2.53 | -2.04 | -- | -1.05 | 12.4 | 80 | 1158 | -- | -- |
| 561.13 | 1.1 | 6.3 | -4.48 | 3.26 | 2.58 | -- | 0.374 | -1.05 | 12.4 | 79.95 | 1149 | -- | -- |
| 561.49 | 1.1 | 6.31 | -4.52 | 3.23 | 2.6 | -- | -- | -1.06 | 12.4 | 80 | 1154 | -- | -- |
| 777.51 | 1.31 | 6.35 | -4.29 | -- | 3.89 | -- | -2.27 | -1.02 | -- | 82.02 | 1613 | -- | -- |
| 677.61 | 1.22 | 6.33 | -4 | 2.65 | -- | -2.43 | -- | -1.15 | 12.5 | -- | -- | -- | -- |
| 702.9 | 1.24 | 6.34 | -4.09 | 2.66 | -- | -- | -- | -1.16 | 12.4 | -- | -- | -- | -- |
| 770.6 | 1.3 | 6.35 | -4.27 | -- | 3.79 | -- | -- | -1.04 | -- | 84.21 | 1629 | -- | -- |
| 1058.06 | 1.51 | 6.24 | -- | 3.31 | 2.32 | -- | -- | -0.747 | 12.4 | 94 | 1108 | -- | -- |
| 1147.78 | 1.58 | 6.39 | -4.18 | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
| 1143.94 | 1.58 | 6.24 | -- | 2.72 | -- | -- | -- | -0.705 | 12.5 | -- | -- | -- | -- |
| 1221.91 | 1.63 | 6.29 | -- | -- | 3.73 | -- | -- | -0.757 | -- | 94 | 1650 | -- | -- |
| 1609.03 | 1.87 | 6.28 | -- | -- | -- | -- | -- | -0.74 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 551.52 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 4 | 553.20 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 20 |
| 5 | 553.22 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 22 |
| 12 | 553.79 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 14 | 553.88 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 43 | 554.77 | humidity | 80 | 1440 | < th | dose dependent | sin | 3 | NA |
| 56 | 555.00 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 57 | 555.04 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 59 | 555.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 147 | 556.83 | humidity | 80 | 720 | < th | dose dependent | sin | 11 | NA |
| 200 | 559.43 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 303 | 562.11 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 19 |
| 306 | 562.23 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 336 | 562.86 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 369 | 563.59 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 21 |
| 429 | 565.21 | humidity | 50 | 720 | > th | dose dependent | rect. | 3 | 18 |
| 445 | 565.52 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 458 | 565.94 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 464 | 566.12 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 15 |
| 472 | 566.36 | humidity | 50 | 1440 | > th | dose dependent | sin | 1 | NA |
| 482 | 566.50 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 496 | 566.81 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 529 | 567.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 11 |
| 532 | 567.23 | wind | 3 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 533 | 567.24 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 9 |
| 547 | 567.48 | humidity | 70 | 720 | < th | dose independent | sin | 11 | NA |
| 596 | 568.18 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 599 | 568.21 | humidity | 70 | 1440 | < th | dose dependent | rect. | 14 | 4 |
| 656 | 568.22 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 719 | 568.72 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 799 | 569.46 | humidity | 80 | 720 | > th | dose independent | rect. | 3 | 19 |
| 840 | 569.89 | humidity | 80 | 720 | < th | dose dependent | rect. | 15 | 13 |
| 860 | 569.94 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 917 | 570.43 | humidity | 70 | 720 | > th | dose independent | sin | 11 | NA |