BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0264800 Os02g0264800|AK069678
         (73 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46330.1  | chr2:19018730-19019108 REVERSE LENGTH=74            64   2e-11
AT3G61640.1  | chr3:22810283-22810629 REVERSE LENGTH=75            59   4e-10
AT5G24105.1  | chr5:8152097-8152656 FORWARD LENGTH=64              47   1e-06
AT5G53250.1  | chr5:21603715-21604007 FORWARD LENGTH=64            46   5e-06

>AT2G46330.1 | chr2:19018730-19019108 REVERSE LENGTH=74
          Length = 73

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/38 (81%), Positives = 33/38 (86%)

Query: 36 VSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 73
           SDGTSID GIAY+LM+VALVLTYLIHPLDASS Y  F
Sbjct: 36 TSDGTSIDQGIAYLLMVVALVLTYLIHPLDASSSYSFF 73



>AT3G61640.1 | chr3:22810283-22810629 REVERSE LENGTH=75
          Length = 74

 Score = 59.3 bits (142), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 31/32 (96%)

Query: 37 SDGTSIDLGIAYILMLVALVLTYLIHPLDASS 68
          SDGTSID GIAY+LM+VALVLTYLIHPLDASS
Sbjct: 37 SDGTSIDQGIAYLLMVVALVLTYLIHPLDASS 68



>AT5G24105.1 | chr5:8152097-8152656 FORWARD LENGTH=64
          Length = 63

 Score = 47.4 bits (111), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/26 (88%), Positives = 25/26 (96%)

Query: 37 SDGTSIDLGIAYILMLVALVLTYLIH 62
          SDGT+ID GIAY+LMLVALVLTYLIH
Sbjct: 38 SDGTTIDQGIAYVLMLVALVLTYLIH 63



>AT5G53250.1 | chr5:21603715-21604007 FORWARD LENGTH=64
          Length = 63

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/26 (80%), Positives = 23/26 (88%)

Query: 37 SDGTSIDLGIAYILMLVALVLTYLIH 62
          SDGTSID GIAY+LM+VAL LTY IH
Sbjct: 38 SDGTSIDQGIAYVLMMVALALTYFIH 63



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.332    0.147    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 704,213
Number of extensions: 12590
Number of successful extensions: 46
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 46
Number of HSP's successfully gapped: 4
Length of query: 73
Length of database: 11,106,569
Length adjustment: 45
Effective length of query: 28
Effective length of database: 9,872,849
Effective search space: 276439772
Effective search space used: 276439772
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 104 (44.7 bits)