Os02g0260400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF37 family protein.
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Os02g0260400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF37 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.86 | 0.36 | 9.23 | -0.854 | 0.228 | 0.971 | 0.0511 | -0.967 | -0.405 | 15.1 | 25.7 | 89 | -- | -- |
| 59.12 | 0.358 | 9.21 | -0.752 | 0.243 | 0.889 | -0.0619 | -- | -0.378 | 15.1 | 25.7 | 84 | -- | -- |
| 58.86 | 0.357 | 9.23 | -0.85 | 0.228 | 0.97 | -- | -0.922 | -0.405 | 15.1 | 25.7 | 89 | -- | -- |
| 59.13 | 0.36 | 9.22 | -0.744 | 0.257 | 0.918 | -- | -- | -0.381 | 16.2 | 25.7 | 89 | -- | -- |
| 60.35 | 0.362 | 9.25 | -0.945 | -- | 1.14 | -- | -1 | -0.505 | -- | 24.15 | 100 | -- | -- |
| 71.6 | 0.397 | 9.21 | -0.616 | 0.579 | -- | 0.258 | -- | -0.336 | 15.4 | -- | -- | -- | -- |
| 71.81 | 0.397 | 9.21 | -0.611 | 0.58 | -- | -- | -- | -0.335 | 15.4 | -- | -- | -- | -- |
| 60.89 | 0.363 | 9.23 | -0.807 | -- | 1.07 | -- | -- | -0.46 | -- | 24.19 | 100 | -- | -- |
| 73.16 | 0.401 | 9.2 | -- | 0.337 | 0.741 | -- | -- | -0.29 | 15.9 | 25.81 | 90 | -- | -- |
| 90.7 | 0.445 | 9.21 | -0.636 | -- | -- | -- | -- | -0.35 | -- | -- | -- | -- | -- |
| 81.66 | 0.423 | 9.19 | -- | 0.592 | -- | -- | -- | -0.267 | 15.4 | -- | -- | -- | -- |
| 77.43 | 0.41 | 9.21 | -- | -- | 0.947 | -- | -- | -0.345 | -- | 24.57 | 109 | -- | -- |
| 101.37 | 0.47 | 9.19 | -- | -- | -- | -- | -- | -0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.39 | temperature | 20 | 270 | > th | dose dependent | sin | 3 | NA |
| 5 | 56.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 14 |
| 12 | 56.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 11 |
| 41 | 57.26 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 48 | 57.32 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 13 |
| 68 | 57.57 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 70 | 57.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 6 |
| 82 | 57.68 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 87 | 57.73 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 92 | 57.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 99 | 57.86 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 161 | 58.15 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 10 |
| 185 | 58.28 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 195 | 58.33 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 214 | 58.42 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 238 | 58.50 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 21 |
| 245 | 58.53 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 246 | 58.53 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 22 |
| 261 | 58.59 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 293 | 58.66 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 14 |
| 323 | 58.71 | temperature | 25 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 349 | 58.77 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 368 | 58.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 14 |
| 375 | 58.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 525 | 59.07 | temperature | 25 | 270 | > th | dose independent | sin | 2 | NA |
| 541 | 59.09 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 564 | 59.14 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 570 | 59.15 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 9 |
| 656 | 59.28 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 661 | 59.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 701 | 59.35 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 733 | 59.43 | temperature | 25 | 270 | < th | dose independent | sin | 2 | NA |
| 938 | 59.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 3 |