Os02g0254800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Eggshell protein family protein.
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Os02g0254800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Eggshell protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.36 | 0.532 | 3 | 0.0311 | 1.31 | 1.72 | 4.72 | 5.11 | 0.115 | 17.9 | 1.14 | 722 | -- | -- |
| 130.94 | 0.533 | 2.96 | 0.122 | 0.479 | 0.765 | 0.78 | -- | 0.155 | 18.6 | 4.686 | 757 | -- | -- |
| 133.36 | 0.542 | 2.95 | 0.038 | 0.144 | -0.0338 | -- | 0.125 | 0.111 | 2.23 | 0.0003453 | 277 | -- | -- |
| 131.97 | 0.535 | 2.96 | 0.0885 | 0.498 | 0.778 | -- | -- | 0.147 | 18.9 | 3.67 | 783 | -- | -- |
| 132.64 | 0.536 | 2.95 | 0.0512 | -- | 0.173 | -- | 0.197 | 0.127 | -- | 26.96 | 345 | -- | -- |
| 132.92 | 0.54 | 2.95 | 0.0466 | 0.107 | -- | -0.569 | -- | 0.113 | 5.25 | -- | -- | -- | -- |
| 133.49 | 0.541 | 2.95 | 0.0447 | 0.119 | -- | -- | -- | 0.115 | 3.13 | -- | -- | -- | -- |
| 132.69 | 0.536 | 2.95 | 0.0598 | -- | 0.19 | -- | -- | 0.131 | -- | 34.66 | 397 | -- | -- |
| 132.18 | 0.535 | 2.96 | -- | 0.494 | 0.779 | -- | -- | 0.139 | 18.9 | 3.819 | 787 | -- | -- |
| 134.29 | 0.541 | 2.95 | 0.0498 | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
| 133.54 | 0.541 | 2.95 | -- | 0.12 | -- | -- | -- | 0.11 | 3.13 | -- | -- | -- | -- |
| 132.77 | 0.537 | 2.95 | -- | -- | 0.196 | -- | -- | 0.126 | -- | 35 | 397 | -- | -- |
| 134.36 | 0.541 | 2.95 | -- | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.45 | wind | 7.0 | 90 | > th | dose dependent | rect. | 23 | 2 |
| 2 | 118.03 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 4 |
| 10 | 118.03 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 4 |
| 18 | 118.06 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 22 | 118.06 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 67 | 118.31 | wind | 7.0 | 90 | > th | dose independent | rect. | 22 | 1 |
| 111 | 120.45 | humidity | 80.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 114 | 121.05 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 124 | 121.05 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 141 | 122.13 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 144 | 122.54 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 13 |
| 148 | 122.65 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 13 | 7 |
| 172 | 122.69 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 275 | 123.36 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 16 |
| 287 | 123.43 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 295 | 123.58 | humidity | 90.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 299 | 123.66 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 335 | 123.78 | wind | 5.0 | 270 | > th | dose dependent | rect. | 20 | 4 |
| 397 | 124.26 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 19 | 2 |
| 414 | 124.36 | wind | 5.0 | 270 | > th | dose independent | rect. | 20 | 4 |
| 476 | 125.20 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 523 | 125.86 | temperature | 25.0 | 90 | < th | dose independent | rect. | 19 | 2 |
| 557 | 126.09 | wind | 3.0 | 10 | > th | dose independent | rect. | 23 | 1 |
| 562 | 126.11 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 9 |
| 575 | 126.19 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 609 | 126.50 | wind | 3.0 | 270 | < th | dose independent | rect. | 17 | 2 |
| 643 | 126.70 | wind | 9.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 647 | 126.71 | humidity | 80.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 650 | 126.71 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 674 | 126.84 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 4 |
| 679 | 126.84 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 696 | 126.89 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 10 | 11 |
| 710 | 126.92 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 722 | 126.96 | humidity | 80.0 | 90 | > th | dose independent | rect. | 11 | 10 |
| 772 | 127.14 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 792 | 127.21 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 16 | 4 |
| 798 | 127.23 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 799 | 127.23 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 19 |
| 819 | 127.32 | radiation | 1.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 820 | 127.32 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 2 |
| 826 | 127.34 | precipitation | 0.1 | 30 | < th | dose independent | sin | 23 | NA |
| 829 | 127.34 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 23 | NA |
| 832 | 127.35 | temperature | 25.0 | 270 | < th | dose independent | rect. | 16 | 4 |
| 834 | 127.35 | wind | 1.0 | 90 | < th | dose dependent | rect. | 21 | 1 |
| 848 | 127.38 | radiation | 1.0 | 720 | < th | dose independent | sin | 15 | NA |
| 858 | 127.39 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 868 | 127.40 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 22 | NA |
| 873 | 127.41 | precipitation | 0.1 | 30 | > th | dose independent | sin | 23 | NA |
| 878 | 127.41 | wind | 1.0 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 894 | 127.44 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 19 |
| 914 | 127.47 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 19 | 2 |
| 917 | 127.48 | radiation | 30.0 | 720 | < th | dose independent | rect. | 15 | 15 |
| 921 | 127.49 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 12 |
| 927 | 127.50 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 6 |
| 930 | 127.50 | radiation | 1.0 | 720 | < th | dose independent | rect. | 12 | 15 |
| 935 | 127.51 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 11 |
| 943 | 127.52 | radiation | 1.0 | 720 | < th | dose independent | rect. | 4 | 16 |
| 958 | 127.54 | wind | 1.0 | 10 | < th | dose dependent | rect. | 13 | 9 |
| 978 | 127.57 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 980 | 127.57 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 13 |
| 994 | 127.58 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 16 |