Os02g0253700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0253700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 300.47 | 0.814 | 4.03 | -0.375 | 0.731 | 1.63 | 0.613 | -2.26 | 3.59 | 17.6 | 22.16 | 1780 | -- | -- |
| 303.35 | 0.811 | 3.95 | 0.256 | 0.755 | 1.49 | 0.512 | -- | 3.75 | 17.7 | 21.27 | 1777 | -- | -- |
| 301.38 | 0.809 | 4.02 | -0.366 | 0.73 | 1.64 | -- | -2.21 | 3.6 | 17.6 | 22.12 | 1794 | -- | -- |
| 304 | 0.812 | 3.95 | 0.255 | 0.754 | 1.5 | -- | -- | 3.76 | 17.6 | 21.27 | 1794 | -- | -- |
| 324.98 | 0.84 | 4.05 | -0.616 | -- | 1.9 | -- | -3.72 | 3.55 | -- | 24.2 | 1910 | -- | -- |
| 370.77 | 0.903 | 3.88 | 0.788 | 0.865 | -- | 0.528 | -- | 4.09 | 17.9 | -- | -- | -- | -- |
| 371.45 | 0.903 | 3.88 | 0.783 | 0.868 | -- | -- | -- | 4.1 | 17.9 | -- | -- | -- | -- |
| 331.2 | 0.848 | 3.94 | 0.217 | -- | 1.59 | -- | -- | 3.74 | -- | 22.04 | 1929 | -- | -- |
| 305.47 | 0.814 | 3.96 | -- | 0.732 | 1.58 | -- | -- | 3.71 | 17.6 | 20.91 | 1795 | -- | -- |
| 410.47 | 0.947 | 3.86 | 0.758 | -- | -- | -- | -- | 4.08 | -- | -- | -- | -- | -- |
| 387.63 | 0.921 | 3.9 | -- | 0.856 | -- | -- | -- | 4.01 | 18 | -- | -- | -- | -- |
| 332.26 | 0.849 | 3.95 | -- | -- | 1.66 | -- | -- | 3.69 | -- | 21.62 | 1926 | -- | -- |
| 425.6 | 0.963 | 3.88 | -- | -- | -- | -- | -- | 3.99 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 300.23 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 3 | 300.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 7 | 301.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 14 | 301.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 9 |
| 40 | 302.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 49 | 302.25 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 102 | 303.11 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 9 |
| 106 | 303.17 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 9 |
| 117 | 303.26 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 136 | 303.42 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 137 | 303.42 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 140 | 303.44 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 171 | 303.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 22 |
| 207 | 303.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 214 | 303.99 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 236 | 304.07 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 249 | 304.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 276 | 304.27 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 313 | 304.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 400 | 304.94 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 13 |
| 436 | 305.21 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 485 | 305.44 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 532 | 305.68 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 17 |
| 550 | 305.76 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 589 | 305.97 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 599 | 306.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 600 | 306.01 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 673 | 306.31 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 695 | 306.40 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 806 | 306.75 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 819 | 306.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 821 | 306.81 | temperature | 25 | 4320 | > th | dose independent | sin | 1 | NA |
| 828 | 306.83 | temperature | 25 | 1440 | < th | dose independent | sin | 19 | NA |
| 855 | 306.89 | temperature | 25 | 1440 | > th | dose independent | sin | 19 | NA |
| 860 | 306.90 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 880 | 306.95 | temperature | 25 | 4320 | < th | dose independent | sin | 1 | NA |
| 884 | 306.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 6 |