Os02g0252600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aminotransferase, class IV family protein.
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Os02g0252600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aminotransferase, class IV family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.7 | 0.488 | 6.51 | -0.765 | 0.564 | -0.293 | -0.584 | -2.95 | 0.117 | 0.43 | 0.7492 | 6030 | -- | -- |
| 114.59 | 0.499 | 6.54 | -0.633 | 0.586 | -0.674 | -0.6 | -- | 0.153 | 0.4 | 1.283 | 4680 | -- | -- |
| 109.12 | 0.487 | 6.51 | -0.722 | 0.568 | -0.254 | -- | -2.74 | 0.127 | 0.471 | 0.9368 | 6056 | -- | -- |
| 116.03 | 0.502 | 6.53 | -0.632 | 0.573 | -0.7 | -- | -- | 0.17 | 0.494 | 1.008 | 4680 | -- | -- |
| 129.04 | 0.529 | 6.5 | -0.7 | -- | -0.223 | -- | -2.73 | 0.135 | -- | 0.9992 | 6056 | -- | -- |
| 123.18 | 0.52 | 6.55 | -0.496 | 0.576 | -- | -0.507 | -- | 0.0947 | 0.486 | -- | -- | -- | -- |
| 124.29 | 0.522 | 6.55 | -0.477 | 0.578 | -- | -- | -- | 0.0971 | 0.538 | -- | -- | -- | -- |
| 134.78 | 0.541 | 6.53 | -0.701 | -- | -0.84 | -- | -- | 0.161 | -- | 1.5 | 2371 | -- | -- |
| 125.87 | 0.523 | 6.53 | -- | 0.565 | -0.483 | -- | -- | 0.216 | 0.397 | 1 | 4800 | -- | -- |
| 145.25 | 0.563 | 6.54 | -0.457 | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
| 130.28 | 0.534 | 6.54 | -- | 0.571 | -- | -- | -- | 0.15 | 0.497 | -- | -- | -- | -- |
| 146.04 | 0.563 | 6.52 | -- | -- | -0.53 | -- | -- | 0.207 | -- | 1.5 | 2373 | -- | -- |
| 150.75 | 0.573 | 6.53 | -- | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 2 | 104.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 3 | 104.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 4 | 104.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 5 | 104.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 6 | 105.63 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 7 | 105.63 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 8 | 105.66 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 9 | 105.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 10 | 105.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 11 | 105.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 12 | 105.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 13 | 105.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 14 | 105.81 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 15 | 105.99 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 18 | 106.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 30 | 106.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 33 | 106.19 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 34 | 106.19 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 35 | 106.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 42 | 106.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 45 | 106.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 47 | 106.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 48 | 106.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 49 | 106.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 51 | 106.32 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 58 | 106.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 61 | 106.46 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 70 | 106.53 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 76 | 106.57 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 84 | 106.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 91 | 106.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 97 | 106.84 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 115 | 107.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 117 | 107.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 126 | 107.07 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 131 | 107.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 15 |
| 132 | 107.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 15 |
| 134 | 107.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 15 |
| 142 | 107.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 157 | 107.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 158 | 107.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 160 | 107.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 175 | 107.35 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 178 | 107.36 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 181 | 107.37 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 183 | 107.37 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 185 | 107.37 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 193 | 107.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 195 | 107.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 197 | 107.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 214 | 107.47 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 219 | 107.50 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 220 | 107.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 221 | 107.50 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 222 | 107.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 224 | 107.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 232 | 107.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 247 | 107.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 249 | 107.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 252 | 107.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 287 | 107.77 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 322 | 107.85 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 19 |
| 335 | 107.88 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 355 | 107.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 15 |
| 358 | 107.96 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 8 |
| 359 | 107.96 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 8 |
| 361 | 107.97 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 370 | 107.98 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 400 | 108.06 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 401 | 108.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 418 | 108.11 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 422 | 108.14 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 432 | 108.16 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 439 | 108.19 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 483 | 108.27 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 494 | 108.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 20 |
| 500 | 108.30 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 501 | 108.30 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 514 | 108.35 | wind | 1.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 530 | 108.38 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 551 | 108.43 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 572 | 108.47 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 648 | 108.67 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 654 | 108.68 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 656 | 108.68 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 660 | 108.70 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 664 | 108.71 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 675 | 108.71 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 682 | 108.73 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 763 | 108.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 796 | 108.86 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 802 | 108.87 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 826 | 108.89 | humidity | 60.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 835 | 108.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 840 | 108.91 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 917 | 108.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 15 |
| 952 | 108.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 961 | 108.96 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 972 | 108.96 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 14 | 22 |
| 999 | 108.97 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 11 | 4 |