Os02g0245100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxisomal targeting signal type 2 receptor.
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Os02g0245100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxisomal targeting signal type 2 receptor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.66 | 0.307 | 9.56 | 0.153 | 0.364 | 0.691 | 0.521 | 1.09 | -0.38 | 15 | 71 | 6222 | -- | -- |
| 44.32 | 0.31 | 9.56 | 0.0955 | 0.352 | 0.752 | 0.596 | -- | -0.407 | 14.9 | 71 | 6256 | -- | -- |
| 43.51 | 0.307 | 9.56 | 0.167 | 0.377 | 0.671 | -- | 1.24 | -0.369 | 15.3 | 71 | 6133 | -- | -- |
| 45.35 | 0.314 | 9.56 | 0.135 | 0.383 | 0.699 | -- | -- | -0.425 | 15.3 | 70.95 | 7498 | -- | -- |
| 51.16 | 0.333 | 9.56 | 0.154 | -- | 0.783 | -- | 1.02 | -0.398 | -- | 71 | 6220 | -- | -- |
| 53 | 0.341 | 9.54 | 0.0527 | 0.413 | -- | 0.487 | -- | -0.288 | 15.4 | -- | -- | -- | -- |
| 53.73 | 0.343 | 9.53 | 0.0615 | 0.417 | -- | -- | -- | -0.286 | 15.5 | -- | -- | -- | -- |
| 52.55 | 0.338 | 9.57 | 0.0939 | -- | 0.806 | -- | -- | -0.409 | -- | 70 | 6222 | -- | -- |
| 45.84 | 0.315 | 9.57 | -- | 0.386 | 0.682 | -- | -- | -0.437 | 15.4 | 71 | 7474 | -- | -- |
| 63.42 | 0.372 | 9.53 | 0.044 | -- | -- | -- | -- | -0.297 | -- | -- | -- | -- | -- |
| 53.83 | 0.343 | 9.54 | -- | 0.415 | -- | -- | -- | -0.292 | 15.5 | -- | -- | -- | -- |
| 52.72 | 0.338 | 9.56 | -- | -- | 0.832 | -- | -- | -0.43 | -- | 70.67 | 6222 | -- | -- |
| 63.47 | 0.372 | 9.54 | -- | -- | -- | -- | -- | -0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.98 | humidity | 60 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 7 | 42.46 | humidity | 60 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 8 | 42.52 | humidity | 60 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 9 | 42.53 | humidity | 80 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 45 | 42.93 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 54 | 42.96 | humidity | 80 | 4320 | < th | dose dependent | rect. | 10 | 15 |
| 142 | 43.17 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 155 | 43.20 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 197 | 43.27 | humidity | 70 | 4320 | > th | dose independent | rect. | 15 | 22 |
| 199 | 43.27 | humidity | 80 | 4320 | < th | dose dependent | sin | 19 | NA |
| 204 | 43.27 | humidity | 80 | 4320 | < th | dose dependent | rect. | 19 | 21 |
| 219 | 43.30 | humidity | 70 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 246 | 43.33 | humidity | 70 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 266 | 43.36 | humidity | 70 | 4320 | < th | dose independent | rect. | 9 | 10 |
| 289 | 43.37 | humidity | 70 | 4320 | < th | dose independent | sin | 1 | NA |
| 349 | 43.40 | humidity | 80 | 4320 | < th | dose dependent | no | NA | NA |
| 411 | 43.42 | humidity | 80 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 478 | 43.46 | humidity | 70 | 4320 | < th | dose independent | no | NA | NA |
| 631 | 43.50 | humidity | 50 | 4320 | > th | dose dependent | sin | 23 | NA |
| 650 | 43.51 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 673 | 43.52 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 14 |
| 675 | 43.52 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 17 |
| 676 | 43.52 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 19 |
| 694 | 43.53 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 11 |
| 749 | 43.55 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 839 | 43.59 | humidity | 70 | 4320 | > th | dose independent | sin | 1 | NA |
| 843 | 43.59 | humidity | 70 | 4320 | > th | dose independent | no | NA | NA |