Os02g0244600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ataxin-2, C-terminal domain containing protein.
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Os02g0244600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ataxin-2, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.05 | 0.47 | 9.26 | -1.47 | 1.98 | 1.41 | -0.137 | 1.85 | -0.223 | 9.79 | 9.789 | 7 | -- | -- |
| 102.13 | 0.471 | 9.28 | -1.74 | 1.97 | 1.34 | 0.237 | -- | -0.302 | 9.76 | 16.82 | 2 | -- | -- |
| 99.95 | 0.466 | 9.26 | -1.49 | 1.97 | 1.4 | -- | 1.69 | -0.228 | 9.8 | 12.31 | 3 | -- | -- |
| 102.17 | 0.471 | 9.29 | -1.72 | 1.97 | 1.3 | -- | -- | -0.294 | 9.8 | 16.8 | 2 | -- | -- |
| 315.3 | 0.827 | 9.35 | -1.73 | -- | 2.5 | -- | 1.54 | -0.39 | -- | 5.877 | 2 | -- | -- |
| 121.75 | 0.517 | 9.24 | -1.46 | 2.17 | -- | 0.355 | -- | -0.0912 | 10.5 | -- | -- | -- | -- |
| 122.26 | 0.518 | 9.24 | -1.45 | 2.16 | -- | -- | -- | -0.0904 | 10.5 | -- | -- | -- | -- |
| 315.45 | 0.827 | 9.37 | -1.92 | -- | 2.19 | -- | -- | -0.438 | -- | 17.72 | 2 | -- | -- |
| 172.3 | 0.611 | 9.22 | -- | 2.07 | 0.577 | -- | -- | -0.0133 | 10.2 | 19.7 | 2 | -- | -- |
| 409.47 | 0.946 | 9.3 | -1.49 | -- | -- | -- | -- | -0.0992 | -- | -- | -- | -- | -- |
| 177.6 | 0.623 | 9.21 | -- | 2.17 | -- | -- | -- | 0.0709 | 10.5 | -- | -- | -- | -- |
| 406.48 | 0.939 | 9.31 | -- | -- | 1.61 | -- | -- | -0.16 | -- | 19.55 | 2 | -- | -- |
| 467.76 | 1.01 | 9.26 | -- | -- | -- | -- | -- | 0.0657 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.18 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 2 | 90.67 | temperature | 15 | 10 | > th | dose dependent | sin | 2 | NA |
| 6 | 91.18 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 8 | 91.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 12 | 92.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 22 |
| 13 | 92.19 | temperature | 30 | 30 | < th | dose dependent | sin | 3 | NA |
| 19 | 92.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 29 | 92.74 | temperature | 10 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 34 | 92.92 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 93 | 94.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 127 | 95.16 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 142 | 95.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 155 | 95.60 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 21 |
| 158 | 95.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 14 |
| 161 | 95.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 231 | 96.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 12 |
| 242 | 96.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 284 | 97.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 421 | 98.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 436 | 99.05 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 12 |
| 448 | 99.11 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 460 | 99.27 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 480 | 99.39 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 594 | 100.12 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 19 |
| 595 | 100.12 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 684 | 100.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 718 | 100.69 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 21 |
| 757 | 100.90 | radiation | 30 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 892 | 101.69 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 12 |
| 899 | 101.75 | radiation | 10 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 928 | 101.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 11 |
| 930 | 101.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 937 | 102.00 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 962 | 102.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 964 | 102.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 984 | 102.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 988 | 102.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 991 | 102.23 | temperature | 25 | 30 | > th | dose independent | rect. | 5 | 13 |