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Os02g0232400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Citrate synthase, glyoxysomal precursor (EC 2.3.3.1) (GCS).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0146) R2 : 0.00275
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0344 (0.0307) R2dN8 : 0.00355 R2N8 : 0.00275
σ : 0.275
deviance : 34.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.66 0.214 12.4 -0.419 0.322 -0.112 -0.34 1.02 0.0277 19.7 6.985 4285 -- --
21.39 0.215 12.4 -0.377 0.327 -0.245 -0.445 -- 0.00932 19.8 7.479 4227 -- --
20.82 0.213 12.4 -0.437 0.317 0.00591 -- 1.48 0.0404 19.4 7.296 3956 -- --
21.54 0.216 12.5 -0.391 0.328 -0.268 -- -- 0.0127 19.5 7.5 4185 -- --
25.93 0.237 12.4 -0.428 -- -0.00594 -- 1.53 0.0359 -- 7.254 3788 -- --
22.64 0.223 12.5 -0.5 0.31 -- -0.329 -- -0.0158 19.8 -- -- -- --
22.91 0.224 12.5 -0.49 0.313 -- -- -- -0.0156 19.5 -- -- -- --
26.72 0.241 12.5 -0.371 -- -0.255 -- -- -0.0411 -- 7.1 5048 -- --
24.38 0.23 12.4 -- 0.315 -0.358 -- -- 0.117 19.6 7.487 47520 -- --
28.15 0.248 12.5 -0.495 -- -- -- -- -0.0205 -- -- -- -- --
29.25 0.253 12.5 -- 0.318 -- -- -- 0.039 19.4 -- -- -- --
29.64 0.254 12.4 -- -- -0.358 -- -- 0.107 -- 8.745 47520 -- --
34.62 0.275 12.4 -- -- -- -- -- 0.0344 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.29 radiation 10.0 270 > th dose independent rect. 11 1
2 19.44 temperature 10.0 10 > th dose dependent rect. 6 16
3 19.45 temperature 10.0 90 > th dose dependent rect. 6 15
5 19.51 temperature 20.0 720 < th dose independent rect. 1 6
13 19.55 temperature 15.0 720 > th dose dependent rect. 5 4
19 19.63 temperature 10.0 720 > th dose dependent rect. 5 6
20 19.64 temperature 20.0 720 < th dose independent rect. 5 2
26 19.68 temperature 20.0 720 > th dose independent rect. 5 4
30 19.69 temperature 30.0 270 < th dose independent rect. 12 17
31 19.69 temperature 20.0 720 < th dose dependent rect. 3 2
37 19.71 temperature 25.0 720 < th dose dependent rect. 2 6
50 19.73 radiation 40.0 10 < th dose independent rect. 7 15
65 19.77 wind 7.0 4320 < th dose independent rect. 15 1
83 19.80 temperature 20.0 720 < th dose independent rect. 2 1
84 19.80 wind 9.0 4320 > th dose independent rect. 17 2
85 19.80 wind 9.0 4320 < th dose independent rect. 17 2
90 19.81 wind 7.0 4320 > th dose independent rect. 15 1
97 19.81 temperature 10.0 10 > th dose dependent rect. 24 11
123 19.85 radiation 40.0 90 < th dose independent rect. 6 5
128 19.86 temperature 25.0 270 < th dose independent rect. 9 2
140 19.87 temperature 20.0 720 < th dose independent sin 7 NA
142 19.87 humidity 70.0 270 > th dose independent rect. 18 11
168 19.90 temperature 30.0 270 < th dose independent rect. 8 21
169 19.90 wind 5.0 4320 > th dose dependent rect. 15 1
186 19.92 precipitation 0.1 90 < th dose independent rect. 6 15
187 19.92 radiation 40.0 10 < th dose independent rect. 19 16
190 19.92 radiation 1.0 270 > th dose dependent rect. 11 1
196 19.92 precipitation 0.1 90 < th dose dependent rect. 6 15
201 19.93 temperature 20.0 10 > th dose independent rect. 6 16
226 19.96 radiation 10.0 30 > th dose independent rect. 11 3
228 19.96 radiation 1.0 10 > th dose independent rect. 11 5
229 19.96 humidity 60.0 14400 > th dose independent rect. 20 11
237 19.97 wind 5.0 4320 < th dose independent rect. 18 1
239 19.97 temperature 25.0 720 < th dose dependent sin 7 NA
247 19.98 humidity 90.0 4320 > th dose independent rect. 18 1
251 19.98 wind 7.0 4320 > th dose dependent rect. 17 2
267 19.99 temperature 10.0 720 > th dose dependent rect. 23 10
268 19.99 humidity 60.0 90 > th dose dependent rect. 17 13
280 20.01 wind 5.0 4320 > th dose independent rect. 18 1
287 20.01 radiation 40.0 10 < th dose independent rect. 12 23
290 20.01 radiation 1.0 30 > th dose dependent rect. 11 3
292 20.01 radiation 1.0 10 > th dose dependent rect. 11 19
295 20.02 humidity 60.0 14400 > th dose independent rect. 3 4
297 20.02 temperature 20.0 720 > th dose independent rect. 23 10
299 20.02 temperature 30.0 270 < th dose independent rect. 17 12
326 20.03 radiation 1.0 270 < th dose dependent rect. 18 11
346 20.05 humidity 60.0 10 > th dose independent rect. 19 16
352 20.05 humidity 90.0 30 < th dose dependent rect. 11 3
355 20.06 atmosphere 995.0 14400 > th dose independent rect. 12 1
362 20.06 temperature 30.0 270 < th dose independent rect. 15 13
363 20.06 radiation 40.0 10 < th dose independent rect. 7 13
375 20.07 wind 9.0 4320 > th dose independent rect. 15 6
376 20.07 humidity 60.0 14400 > th dose independent rect. 23 9
387 20.07 radiation 1.0 10 > th dose dependent rect. 11 5
390 20.07 radiation 1.0 10 > th dose dependent rect. 11 8
413 20.08 wind 7.0 90 < th dose dependent rect. 6 5
438 20.09 atmosphere 1015.0 90 < th dose independent rect. 21 9
443 20.09 wind 9.0 90 < th dose independent rect. 6 15
460 20.10 wind 9.0 4320 > th dose dependent rect. 15 4
466 20.10 temperature 10.0 30 > th dose dependent rect. 14 21
470 20.11 humidity 60.0 90 > th dose independent rect. 6 5
473 20.11 wind 5.0 90 < th dose independent rect. 20 10
474 20.11 wind 1.0 30 > th dose independent rect. 24 11
491 20.12 wind 7.0 4320 < th dose independent rect. 14 6
496 20.12 wind 1.0 30 > th dose independent rect. 14 21
524 20.13 humidity 50.0 270 > th dose independent rect. 8 21
528 20.13 temperature 15.0 10 > th dose dependent rect. 6 5
541 20.14 temperature 30.0 10 < th dose independent rect. 19 16
544 20.14 radiation 40.0 10 < th dose independent rect. 16 19
551 20.14 humidity 60.0 10 > th dose dependent rect. 17 13
568 20.15 temperature 10.0 720 > th dose dependent rect. 23 17
578 20.16 atmosphere 1015.0 10 < th dose independent rect. 22 8
591 20.16 wind 5.0 4320 > th dose dependent rect. 15 4
602 20.16 temperature 10.0 10 > th dose dependent rect. 19 16
604 20.16 temperature 10.0 30 > th dose dependent rect. 12 23
610 20.17 radiation 1.0 270 < th dose independent rect. 18 11
614 20.17 precipitation 0.1 30 < th dose independent rect. 19 16
615 20.17 temperature 30.0 10 < th dose independent rect. 13 17
619 20.17 wind 9.0 10 < th dose independent rect. 12 23
620 20.17 precipitation 0.1 270 < th dose independent rect. 12 23
633 20.17 precipitation 0.1 30 < th dose dependent rect. 19 16
634 20.17 precipitation 0.1 270 < th dose dependent rect. 12 23
640 20.18 wind 5.0 90 < th dose independent rect. 6 5
645 20.18 temperature 10.0 10 > th dose independent rect. 11 8
650 20.18 atmosphere 1015.0 10 < th dose independent rect. 11 8
655 20.18 temperature 10.0 10 > th dose independent rect. 19 16
659 20.18 atmosphere 995.0 10 > th dose independent rect. 19 16
665 20.18 temperature 30.0 270 < th dose dependent rect. 8 3
668 20.18 temperature 30.0 270 < th dose dependent rect. 8 5
681 20.19 wind 1.0 10 > th dose independent rect. 11 8
683 20.19 atmosphere 995.0 10 > th dose independent rect. 11 8
684 20.19 precipitation 0.1 10 < th dose independent rect. 11 8
686 20.19 temperature 10.0 90 > th dose independent rect. 21 9
687 20.19 temperature 30.0 90 < th dose independent rect. 21 9
688 20.19 humidity 50.0 90 > th dose independent rect. 21 9
691 20.19 atmosphere 995.0 90 > th dose independent rect. 21 9
692 20.19 radiation 20.0 90 < th dose independent rect. 21 9
699 20.19 atmosphere 1015.0 90 < th dose independent rect. 6 15
701 20.19 wind 9.0 10 < th dose independent rect. 19 16
706 20.19 wind 7.0 30 < th dose dependent rect. 6 7
711 20.19 precipitation 0.1 10 < th dose dependent rect. 11 8
727 20.20 atmosphere 995.0 1440 > th dose independent rect. 12 3
736 20.20 precipitation 0.1 90 < th dose independent rect. 21 9
742 20.20 wind 1.0 4320 > th dose dependent rect. 18 1
743 20.20 wind 9.0 4320 < th dose dependent rect. 18 1
756 20.20 precipitation 0.1 90 < th dose dependent rect. 21 9
764 20.21 wind 1.0 270 > th dose independent rect. 11 1
775 20.21 atmosphere 1000.0 10 > th dose independent rect. 11 13
792 20.21 humidity 50.0 90 > th dose dependent rect. 21 9
801 20.22 temperature 10.0 270 > th dose independent rect. 11 1
802 20.22 temperature 10.0 1440 > th dose independent rect. 12 1
806 20.22 atmosphere 1000.0 30 > th dose independent rect. 11 1
807 20.22 atmosphere 995.0 270 > th dose independent rect. 11 1
809 20.22 atmosphere 1015.0 270 < th dose independent rect. 11 1
811 20.22 precipitation 0.1 270 < th dose independent rect. 11 1
816 20.22 wind 5.0 10 < th dose independent rect. 22 8
821 20.22 temperature 30.0 270 < th dose independent rect. 9 14
823 20.22 wind 9.0 10 < th dose independent rect. 6 16
826 20.22 wind 9.0 10 < th dose independent rect. 14 21
827 20.22 temperature 10.0 270 > th dose independent rect. 12 23
828 20.22 temperature 10.0 1440 > th dose independent rect. 13 23
832 20.22 precipitation 0.1 270 < th dose dependent rect. 11 1
849 20.23 temperature 10.0 30 > th dose independent rect. 11 3
851 20.23 temperature 10.0 1440 > th dose independent rect. 12 3
855 20.23 atmosphere 995.0 30 > th dose independent rect. 11 3
856 20.23 atmosphere 1015.0 30 < th dose independent rect. 11 3
857 20.23 precipitation 0.1 30 < th dose independent rect. 11 3
864 20.23 temperature 10.0 30 > th dose independent rect. 14 21
865 20.23 temperature 10.0 1440 > th dose independent rect. 15 21
868 20.23 precipitation 0.1 30 < th dose independent rect. 14 21
871 20.23 precipitation 0.1 30 < th dose dependent rect. 11 3
879 20.23 radiation 40.0 90 < th dose dependent rect. 21 9
886 20.23 precipitation 0.1 30 < th dose dependent rect. 14 21
887 20.24 wind 9.0 30 < th dose independent rect. 11 1
888 20.24 temperature 10.0 30 > th dose independent rect. 11 1
893 20.24 atmosphere 1015.0 30 < th dose independent rect. 11 1
895 20.24 precipitation 0.1 30 < th dose independent rect. 11 1
912 20.24 atmosphere 1015.0 10 < th dose independent rect. 11 13
916 20.24 atmosphere 995.0 30 > th dose independent rect. 14 21
917 20.24 temperature 10.0 30 > th dose independent rect. 12 23
919 20.24 atmosphere 995.0 30 > th dose independent rect. 12 23
922 20.24 precipitation 0.1 30 < th dose dependent rect. 11 1
931 20.25 humidity 90.0 4320 < th dose independent rect. 18 2
932 20.25 wind 1.0 10 > th dose independent rect. 11 3
937 20.25 humidity 60.0 10 > th dose independent rect. 6 5
941 20.25 temperature 30.0 30 < th dose independent rect. 11 8
951 20.25 wind 1.0 30 > th dose independent rect. 16 19
969 20.25 atmosphere 995.0 30 > th dose dependent rect. 11 8
983 20.26 wind 5.0 10 < th dose independent rect. 6 6
987 20.26 humidity 60.0 10 > th dose independent rect. 24 11
989 20.26 wind 1.0 30 > th dose independent rect. 19 16
992 20.26 wind 1.0 30 > th dose independent rect. 12 23
993 20.26 humidity 60.0 30 > th dose independent rect. 12 23