Os02g0229800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0229800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.68 | 0.512 | 6.82 | 0.818 | 1.06 | 2.34 | 0.523 | 0.531 | -0.271 | 9.25 | 24.8 | 745 | -- | -- |
| 119.02 | 0.508 | 6.81 | 0.889 | 1.07 | 2.28 | 0.695 | -- | -0.254 | 9.2 | 24.9 | 747 | -- | -- |
| 119.52 | 0.509 | 6.82 | 0.787 | 1.06 | 2.37 | -- | 0.83 | -0.281 | 9.26 | 24.79 | 746 | -- | -- |
| 120.48 | 0.511 | 6.81 | 0.924 | 1.06 | 2.27 | -- | -- | -0.25 | 9.28 | 24.93 | 741 | -- | -- |
| 168.87 | 0.605 | 6.81 | 1.01 | -- | 2.79 | -- | 0.0354 | -0.14 | -- | 28.08 | 731 | -- | -- |
| 195.97 | 0.656 | 6.9 | 0.265 | 1.38 | -- | 0.536 | -- | -0.723 | 9.49 | -- | -- | -- | -- |
| 197.02 | 0.657 | 6.9 | 0.285 | 1.37 | -- | -- | -- | -0.722 | 9.5 | -- | -- | -- | -- |
| 168.71 | 0.605 | 6.81 | 1.08 | -- | 2.85 | -- | -- | -0.109 | -- | 28.05 | 733 | -- | -- |
| 140.1 | 0.551 | 6.84 | -- | 1.12 | 1.88 | -- | -- | -0.428 | 9.44 | 24.9 | 649 | -- | -- |
| 308.08 | 0.82 | 6.94 | 0.276 | -- | -- | -- | -- | -0.718 | -- | -- | -- | -- | -- |
| 199.16 | 0.66 | 6.91 | -- | 1.37 | -- | -- | -- | -0.753 | 9.49 | -- | -- | -- | -- |
| 196.03 | 0.652 | 6.86 | -- | -- | 2.51 | -- | -- | -0.368 | -- | 30.78 | 716 | -- | -- |
| 310.08 | 0.822 | 6.95 | -- | -- | -- | -- | -- | -0.748 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 14 | 117.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 32 | 117.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 34 | 117.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 46 | 118.10 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 51 | 118.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 67 | 118.32 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 83 | 118.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 104 | 118.80 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 116 | 118.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 179 | 119.77 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 192 | 119.88 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 197 | 119.98 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 211 | 120.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 232 | 120.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 976 | 125.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |