Os02g0225900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0225900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.51 | 0.445 | 9.8 | 1.47 | 0.468 | 2.77 | 0.514 | 3.17 | -0.0154 | 8.9 | 19.2 | 6988 | -- | -- |
| 97.76 | 0.461 | 9.66 | 1.77 | 0.56 | 2.01 | 0.65 | -- | 0.0874 | 8.75 | 19.2 | 7301 | -- | -- |
| 89.14 | 0.44 | 9.8 | 1.52 | 0.473 | 2.96 | -- | 3.5 | -0.0206 | 9.09 | 18.9 | 7299 | -- | -- |
| 97.77 | 0.461 | 9.65 | 1.7 | 0.488 | 1.81 | -- | -- | 0.0456 | 9.01 | 19.3 | 7287 | -- | -- |
| 100.63 | 0.467 | 9.84 | 1.62 | -- | 3.26 | -- | 4.12 | -0.00063 | -- | 19 | 7861 | -- | -- |
| 139.58 | 0.554 | 9.78 | 0.401 | 0.487 | -- | 0.539 | -- | -0.437 | 9.2 | -- | -- | -- | -- |
| 140.61 | 0.555 | 9.78 | 0.421 | 0.484 | -- | -- | -- | -0.436 | 9.28 | -- | -- | -- | -- |
| 109.92 | 0.488 | 9.69 | 1.69 | -- | 1.87 | -- | -- | 0.0388 | -- | 19.17 | 7848 | -- | -- |
| 102.37 | 0.471 | 9.72 | -- | 0.486 | 0.991 | -- | -- | -0.182 | 8.51 | 22.4 | 1360 | -- | -- |
| 154.25 | 0.58 | 9.79 | 0.418 | -- | -- | -- | -- | -0.434 | -- | -- | -- | -- | -- |
| 145.27 | 0.564 | 9.79 | -- | 0.484 | -- | -- | -- | -0.483 | 9.21 | -- | -- | -- | -- |
| 108.59 | 0.485 | 9.75 | -- | -- | 1.02 | -- | -- | -0.201 | -- | 22.4 | 858 | -- | -- |
| 158.87 | 0.588 | 9.8 | -- | -- | -- | -- | -- | -0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 17 | 87.94 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 24 | 88.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 25 | 88.04 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 32 | 88.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 33 | 88.10 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 131 | 88.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 135 | 88.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 144 | 88.96 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 270 | 89.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 273 | 89.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 289 | 89.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 455 | 90.75 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 472 | 90.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 476 | 90.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 553 | 91.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 698 | 91.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 880 | 92.39 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 903 | 92.49 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |