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Os02g0225200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.53 (0.0311) R2 : 0.805
β1 : 2.7 (0.114) R2dD : 0.249 R2D : 0.201
β2 : 2.71 (0.0789) R2dC : 0.507 R2C : 0.498
β3 : 1.01 (0.0861) R2dE : 0.0599 R2E : 0.0297
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.517 (0.0665) R2dN8 : 0.0351 R2N8 : -0.0116
σ : 0.58
deviance : 155.21
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C
peak time of C : 8.03
E
wheather : humidity
threshold : 71
memory length : 60
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.75
open length of G : 19

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
152.34 0.58 7.53 2.77 2.71 1.02 -0.523 -0.905 0.536 8.04 70.99 55 4.77 19.1
154.87 0.58 7.53 2.72 2.72 1.01 -0.369 -- 0.524 8.01 70.74 55 4.78 19
153.09 0.576 7.53 2.74 2.71 1.03 -- -0.818 0.531 8.02 71 57 4.73 19.1
155.21 0.58 7.53 2.7 2.71 1.01 -- -- 0.517 8.03 71 60 4.75 19
290.54 0.794 7.51 2.89 -- 3.17 -- -2.35 0.852 -- 68.63 536 0.0333 22.3
197.9 0.66 7.55 2.68 2.73 -- -0.459 -- 0.439 7.66 -- -- -- --
198.5 0.66 7.55 2.67 2.73 -- -- -- 0.44 7.66 -- -- -- --
275.71 0.773 7.58 2.63 -- 3.04 -- -- 0.666 -- 70.26 450 0.00051 20.1
344.45 0.864 7.58 -- 2.69 1.15 -- -- 0.235 8.11 80.35 52 4.81 20.7
600.96 1.15 7.61 2.71 -- -- -- -- 0.48 -- -- -- -- --
386.73 0.92 7.61 -- 2.76 -- -- -- 0.142 7.59 -- -- -- --
455.22 0.994 7.64 -- -- 3.07 -- -- 0.381 -- 72.18 443 0.00381 19.7
794.58 1.32 7.68 -- -- -- -- -- 0.179 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 153.76 humidity 70.0 30 > th dose dependent rect. 5 19
2 154.22 humidity 70.0 90 > th dose dependent rect. 10 13
4 154.92 humidity 70.0 90 > th dose dependent rect. 4 21
7 156.29 temperature 15.0 720 > th dose independent rect. 6 12
8 156.34 atmosphere 1015.0 720 < th dose independent rect. 23 19
23 158.04 atmosphere 1015.0 720 < th dose independent rect. 23 10
27 158.34 temperature 15.0 720 > th dose independent rect. 6 5
29 158.55 temperature 10.0 720 > th dose dependent rect. 14 4
37 159.07 temperature 15.0 720 > th dose independent rect. 22 20
47 160.14 humidity 90.0 720 < th dose independent rect. 8 10
81 161.74 humidity 50.0 90 > th dose dependent rect. 18 21
90 162.06 temperature 15.0 720 > th dose independent rect. 21 14
91 162.11 humidity 90.0 720 < th dose independent rect. 14 4
95 162.33 humidity 80.0 30 > th dose independent rect. 5 19
99 162.41 temperature 30.0 10 < th dose dependent rect. 5 19
111 162.68 temperature 20.0 10 > th dose independent rect. 24 20
113 162.74 atmosphere 1015.0 720 < th dose independent rect. 22 5
117 162.88 temperature 20.0 90 > th dose independent rect. 24 18
124 163.01 humidity 50.0 270 > th dose dependent rect. 2 21
125 163.04 temperature 15.0 720 > th dose independent rect. 23 10
132 163.37 temperature 20.0 90 > th dose independent rect. 23 20
152 163.64 humidity 70.0 90 > th dose dependent sin 20 NA
154 163.69 radiation 10.0 720 < th dose dependent rect. 16 14
160 163.79 precipitation 0.1 270 < th dose independent rect. 13 13
161 163.79 precipitation 0.1 270 < th dose dependent rect. 13 13
168 163.88 temperature 30.0 90 < th dose dependent rect. 4 21
170 163.90 radiation 10.0 720 < th dose dependent rect. 16 7
174 164.00 temperature 10.0 90 > th dose dependent rect. 15 13
179 164.12 radiation 10.0 720 < th dose dependent sin 13 NA
191 164.34 temperature 30.0 10 < th dose dependent rect. 5 21
211 164.70 radiation 10.0 720 < th dose dependent rect. 3 19
220 164.87 radiation 10.0 270 < th dose dependent rect. 1 23
229 164.99 temperature 15.0 90 > th dose dependent rect. 23 21
231 165.00 humidity 80.0 90 > th dose independent rect. 10 13
242 165.09 temperature 10.0 270 > th dose dependent rect. 13 13
265 165.31 humidity 90.0 270 > th dose independent rect. 8 14
268 165.34 precipitation 0.1 720 < th dose independent rect. 6 12
269 165.34 precipitation 0.1 720 < th dose dependent rect. 6 12
276 165.41 temperature 10.0 90 > th dose dependent rect. 6 23
277 165.43 atmosphere 1015.0 720 < th dose independent rect. 22 13
279 165.46 temperature 20.0 90 < th dose dependent rect. 4 19
280 165.48 humidity 90.0 90 > th dose independent sin 21 NA
304 165.69 temperature 15.0 720 > th dose independent rect. 15 19
326 165.92 humidity 80.0 10 > th dose independent rect. 10 14
341 166.09 temperature 15.0 720 > th dose independent rect. 22 5
356 166.22 temperature 10.0 270 > th dose dependent rect. 21 21
372 166.33 radiation 10.0 720 < th dose dependent rect. 9 21
375 166.37 radiation 1.0 720 > th dose independent rect. 15 19
398 166.56 humidity 90.0 10 < th dose independent rect. 8 12
403 166.61 radiation 1.0 270 < th dose independent rect. 1 23
409 166.69 radiation 1.0 720 < th dose independent rect. 17 5
448 166.97 radiation 10.0 270 < th dose dependent rect. 16 21
450 167.00 precipitation 0.1 720 < th dose independent rect. 23 19
451 167.00 precipitation 0.1 720 < th dose dependent rect. 23 19
469 167.13 humidity 90.0 270 < th dose independent sin 22 NA
501 167.32 radiation 10.0 720 < th dose dependent rect. 9 13
517 167.50 humidity 60.0 270 > th dose dependent rect. 17 4
522 167.55 radiation 1.0 270 < th dose independent rect. 2 21
524 167.56 temperature 10.0 90 > th dose dependent rect. 21 23
550 167.70 temperature 10.0 10 > th dose dependent rect. 15 14
554 167.72 atmosphere 1015.0 720 < th dose independent rect. 15 19
557 167.75 humidity 70.0 270 > th dose independent rect. 17 13
565 167.78 radiation 20.0 4320 < th dose independent rect. 1 5
566 167.78 humidity 50.0 14400 > th dose independent rect. 19 14
601 167.96 temperature 30.0 90 < th dose dependent rect. 18 21
604 167.98 precipitation 0.1 720 < th dose independent rect. 6 21
607 167.98 precipitation 0.1 720 < th dose dependent rect. 6 21
614 168.04 temperature 15.0 4320 > th dose independent rect. 20 2
628 168.09 atmosphere 1015.0 720 < th dose independent rect. 6 21
646 168.18 radiation 1.0 720 < th dose dependent rect. 17 4
673 168.29 temperature 30.0 270 < th dose independent rect. 17 13
709 168.48 atmosphere 1015.0 1440 < th dose independent rect. 17 2
711 168.50 humidity 50.0 270 > th dose independent rect. 2 11
734 168.64 humidity 90.0 270 < th dose independent rect. 23 19
741 168.66 radiation 1.0 720 > th dose independent rect. 6 23
748 168.69 precipitation 0.1 90 < th dose independent rect. 15 13
749 168.69 precipitation 0.1 90 < th dose dependent rect. 15 13
756 168.73 radiation 1.0 720 > th dose independent rect. 6 13
802 168.91 temperature 20.0 90 < th dose dependent sin 22 NA
853 169.15 precipitation 0.1 720 < th dose independent rect. 15 18
855 169.15 precipitation 0.1 720 < th dose dependent rect. 15 18
866 169.20 humidity 50.0 10 > th dose dependent rect. 5 9
885 169.25 temperature 30.0 270 < th dose dependent rect. 17 4
895 169.30 radiation 1.0 720 < th dose independent rect. 17 12
907 169.35 temperature 10.0 270 > th dose dependent rect. 22 11
918 169.42 humidity 90.0 720 > th dose independent rect. 10 5
945 169.53 temperature 20.0 10 < th dose dependent sin 22 NA
958 169.58 humidity 80.0 10 > th dose independent rect. 8 16
960 169.58 humidity 90.0 30 < th dose dependent rect. 7 13
975 169.64 humidity 70.0 270 > th dose dependent rect. 19 1
986 169.66 humidity 70.0 90 > th dose dependent rect. 9 23
990 169.69 atmosphere 1015.0 720 < th dose independent rect. 1 17
999 169.70 temperature 25.0 90 < th dose dependent rect. 10 21