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Os02g0225000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mitochondrial substrate carrier family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15 (0.0137) R2 : 0.564
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.817 (0.0338) R2dC : 0.562 R2C : 0.555
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0739 (0.0287) R2dN8 : 0.00819 R2N8 : 0.00208
σ : 0.257
deviance : 30.28
__
_____
C
peak time of C : 21.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.17 0.226 15 -0.411 0.686 -0.279 -0.588 -0.505 0.0468 19.7 0.15 119 -- --
24.35 0.23 15 -0.408 0.689 -0.285 -0.286 -- 0.0533 19.6 0.02994 125 -- --
24.03 0.228 15 -0.395 0.654 -0.316 -- -0.429 0.0585 19.5 0.12 120 -- --
24.56 0.231 15 -0.385 0.664 -0.33 -- -- 0.0583 19.4 0.11 120 -- --
37.23 0.286 14.9 -0.386 -- -0.497 -- -0.101 0.0554 -- 0.12 120 -- --
25.89 0.239 15 -0.409 0.817 -- -0.0252 -- 0.0285 21.2 -- -- -- --
25.89 0.238 15 -0.408 0.817 -- -- -- 0.0285 21.3 -- -- -- --
37.29 0.286 14.9 -0.383 -- -0.498 -- -- 0.0565 -- 0.12 120 -- --
28.34 0.248 15 -- 0.668 -0.333 -- -- 0.0875 19.4 0.05338 125 -- --
64.69 0.376 14.9 -0.405 -- -- -- -- 0.0248 -- -- -- -- --
30.28 0.257 15 -- 0.817 -- -- -- 0.0739 21.2 -- -- -- --
41.16 0.3 14.9 -- -- -0.502 -- -- 0.0992 -- 0.12 120 -- --
69.01 0.388 14.9 -- -- -- -- -- 0.0697 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.80 temperature 10.0 270 > th dose dependent rect. 7 19
3 20.99 temperature 10.0 30 > th dose dependent rect. 9 19
4 21.03 atmosphere 995.0 10 > th dose dependent rect. 17 16
9 21.17 atmosphere 995.0 720 > th dose dependent rect. 19 4
12 21.25 humidity 60.0 270 > th dose independent rect. 7 9
14 21.30 atmosphere 995.0 270 > th dose dependent rect. 17 14
17 21.34 atmosphere 995.0 30 > th dose dependent rect. 19 14
34 21.48 temperature 20.0 270 > th dose independent rect. 4 1
35 21.49 temperature 15.0 270 > th dose dependent rect. 4 1
37 21.51 temperature 20.0 270 > th dose independent rect. 3 3
38 21.53 temperature 15.0 270 > th dose dependent rect. 3 3
40 21.55 temperature 15.0 30 > th dose dependent rect. 4 5
42 21.56 atmosphere 1010.0 90 < th dose independent rect. 9 19
46 21.60 temperature 25.0 10 > th dose independent rect. 4 5
53 21.63 temperature 25.0 10 > th dose independent rect. 1 8
59 21.67 temperature 10.0 720 > th dose dependent rect. 7 4
63 21.68 temperature 10.0 270 > th dose dependent rect. 7 8
68 21.69 humidity 60.0 270 > th dose independent rect. 7 20
69 21.70 atmosphere 1000.0 10 > th dose independent rect. 17 16
70 21.70 temperature 15.0 270 > th dose independent rect. 7 20
71 21.70 temperature 20.0 720 > th dose dependent rect. 7 4
96 21.77 humidity 50.0 10 > th dose independent rect. 9 8
98 21.77 radiation 10.0 30 < th dose dependent sin 10 NA
101 21.78 humidity 60.0 270 > th dose independent rect. 9 17
111 21.80 atmosphere 1000.0 270 > th dose independent rect. 17 14
122 21.83 temperature 15.0 90 > th dose independent rect. 9 19
127 21.84 temperature 15.0 270 > th dose independent rect. 9 17
130 21.85 temperature 25.0 10 > th dose independent rect. 22 11
137 21.87 atmosphere 1005.0 270 > th dose dependent rect. 4 1
143 21.89 atmosphere 1015.0 270 < th dose dependent rect. 21 6
144 21.89 temperature 10.0 10 > th dose dependent rect. 9 8
146 21.89 atmosphere 995.0 30 > th dose dependent rect. 15 18
164 21.93 humidity 50.0 10 > th dose independent rect. 9 19
177 21.97 humidity 50.0 4320 > th dose independent rect. 5 5
182 21.98 atmosphere 995.0 270 > th dose dependent rect. 3 3
193 22.00 atmosphere 1000.0 30 > th dose dependent rect. 4 5
217 22.04 atmosphere 1000.0 30 > th dose independent rect. 19 14
225 22.06 temperature 10.0 1440 > th dose independent rect. 5 5
228 22.06 atmosphere 995.0 1440 > th dose independent rect. 5 5
229 22.06 atmosphere 1015.0 1440 < th dose independent rect. 5 5
231 22.06 temperature 10.0 1440 > th dose independent rect. 10 19
254 22.09 radiation 1.0 90 < th dose independent sin 10 NA
279 22.12 atmosphere 995.0 1440 > th dose independent rect. 18 16
280 22.13 atmosphere 1000.0 720 > th dose independent rect. 19 4
287 22.14 humidity 80.0 270 > th dose independent rect. 3 4
295 22.15 wind 1.0 10 > th dose independent rect. 4 5
303 22.15 temperature 10.0 30 > th dose dependent rect. 9 10
310 22.17 radiation 10.0 270 < th dose independent rect. 3 4
312 22.17 temperature 15.0 10 > th dose independent rect. 9 21
319 22.18 wind 1.0 270 > th dose independent rect. 4 1
321 22.18 temperature 15.0 270 > th dose independent rect. 21 6
326 22.18 humidity 50.0 10 > th dose independent rect. 9 21
349 22.21 wind 1.0 270 > th dose independent rect. 7 10
361 22.22 humidity 50.0 10 > th dose independent rect. 9 10
364 22.22 humidity 50.0 270 > th dose dependent rect. 17 14
365 22.23 humidity 70.0 270 > th dose independent rect. 2 7
366 22.23 atmosphere 995.0 10 > th dose independent rect. 9 8
373 22.24 precipitation 0.1 270 < th dose independent rect. 7 20
374 22.24 precipitation 0.1 720 < th dose independent rect. 23 20
376 22.24 humidity 50.0 270 > th dose dependent rect. 2 7
379 22.24 precipitation 0.1 270 < th dose dependent rect. 7 20
380 22.24 precipitation 0.1 720 < th dose dependent rect. 23 20
382 22.25 temperature 15.0 270 > th dose independent rect. 17 10
384 22.25 radiation 20.0 270 < th dose independent rect. 17 14
389 22.25 atmosphere 1015.0 10 < th dose dependent rect. 20 10
390 22.26 wind 9.0 10 < th dose independent rect. 17 16
404 22.27 temperature 10.0 720 > th dose dependent rect. 7 12
408 22.28 precipitation 0.1 270 < th dose independent rect. 9 17
413 22.28 precipitation 0.1 270 < th dose dependent rect. 9 17
415 22.29 radiation 40.0 10 < th dose independent rect. 17 16
417 22.29 precipitation 0.1 270 < th dose independent rect. 5 23
420 22.29 precipitation 0.1 270 < th dose dependent rect. 5 23
424 22.30 humidity 50.0 10 > th dose independent rect. 7 23
426 22.30 atmosphere 1015.0 90 < th dose dependent rect. 23 6
432 22.31 precipitation 0.1 270 < th dose independent rect. 7 10
433 22.31 wind 9.0 270 < th dose independent rect. 17 14
440 22.31 precipitation 0.1 270 < th dose dependent rect. 7 10
444 22.32 atmosphere 1000.0 270 > th dose independent rect. 3 4
446 22.32 atmosphere 1010.0 270 < th dose independent rect. 21 6
447 22.32 temperature 15.0 270 > th dose independent rect. 7 10
454 22.32 humidity 50.0 720 > th dose dependent rect. 19 4
459 22.32 temperature 10.0 270 > th dose dependent rect. 21 6
466 22.33 wind 3.0 10 < th dose independent rect. 6 3
470 22.33 temperature 10.0 10 > th dose independent rect. 9 8
474 22.33 atmosphere 1010.0 10 < th dose independent rect. 9 8
476 22.33 precipitation 0.1 10 < th dose independent rect. 9 8
478 22.33 atmosphere 1015.0 270 < th dose independent rect. 7 10
479 22.33 temperature 10.0 270 > th dose independent rect. 17 14
481 22.33 temperature 10.0 10 > th dose independent rect. 17 16
487 22.33 precipitation 0.1 10 < th dose dependent rect. 9 8
495 22.34 humidity 50.0 270 > th dose dependent rect. 3 4
496 22.34 radiation 40.0 270 < th dose dependent rect. 3 4
506 22.35 radiation 10.0 270 < th dose independent rect. 4 2
529 22.36 wind 7.0 270 < th dose independent rect. 3 4
538 22.36 precipitation 0.1 720 < th dose independent rect. 14 14
544 22.36 precipitation 0.1 720 < th dose dependent rect. 14 14
548 22.37 temperature 10.0 270 > th dose independent rect. 3 4
550 22.37 temperature 30.0 270 < th dose independent rect. 3 4
551 22.37 humidity 50.0 270 > th dose independent rect. 3 4
554 22.37 atmosphere 1015.0 270 < th dose independent rect. 3 4
556 22.37 atmosphere 995.0 270 > th dose independent rect. 7 10
567 22.38 wind 7.0 270 < th dose independent rect. 2 7
568 22.38 wind 9.0 10 < th dose independent rect. 9 8
570 22.38 temperature 15.0 720 > th dose independent rect. 7 12
573 22.38 radiation 20.0 10 < th dose independent rect. 17 16
575 22.38 radiation 10.0 270 < th dose dependent rect. 4 2
578 22.38 temperature 10.0 720 > th dose dependent rect. 5 14
581 22.39 precipitation 0.1 270 < th dose independent rect. 3 4
582 22.39 humidity 90.0 10 < th dose independent rect. 4 5
585 22.39 temperature 10.0 270 > th dose independent rect. 2 7
587 22.39 temperature 30.0 270 < th dose independent rect. 2 7
589 22.39 atmosphere 995.0 270 > th dose independent rect. 2 7
590 22.39 atmosphere 1015.0 270 < th dose independent rect. 2 7
592 22.39 precipitation 0.1 10 < th dose independent rect. 17 16
599 22.39 precipitation 0.1 270 < th dose dependent rect. 3 4
605 22.39 precipitation 0.1 10 < th dose dependent rect. 17 16
610 22.40 wind 1.0 270 > th dose independent rect. 9 17
612 22.40 atmosphere 995.0 30 > th dose independent rect. 9 19
624 22.40 radiation 40.0 270 < th dose dependent rect. 15 16
629 22.41 wind 7.0 270 < th dose independent rect. 15 16
635 22.41 temperature 10.0 30 > th dose dependent rect. 9 13
641 22.42 precipitation 0.1 270 < th dose independent rect. 21 6
643 22.42 temperature 15.0 270 > th dose independent rect. 7 8
644 22.42 temperature 15.0 10 > th dose independent rect. 7 23
652 22.42 precipitation 0.1 270 < th dose dependent rect. 21 6
656 22.42 radiation 40.0 270 < th dose dependent rect. 17 14
658 22.42 radiation 10.0 270 < th dose dependent rect. 9 18
663 22.43 precipitation 0.1 270 < th dose independent rect. 2 7
664 22.43 wind 9.0 270 < th dose independent rect. 7 10
671 22.43 precipitation 0.1 30 < th dose independent rect. 9 19
673 22.43 atmosphere 995.0 720 > th dose independent rect. 11 20
680 22.43 precipitation 0.1 270 < th dose dependent rect. 2 7
683 22.43 precipitation 0.1 30 < th dose dependent rect. 9 19
689 22.44 radiation 40.0 30 < th dose independent rect. 4 5
693 22.44 temperature 30.0 270 < th dose independent rect. 21 6
694 22.44 humidity 50.0 270 > th dose independent rect. 21 6
697 22.44 atmosphere 995.0 270 > th dose independent rect. 21 6
698 22.44 radiation 1.0 270 < th dose independent rect. 21 6
703 22.44 precipitation 0.1 270 < th dose independent rect. 17 10
705 22.44 wind 9.0 270 < th dose independent rect. 3 18
706 22.44 temperature 10.0 270 > th dose independent rect. 3 18
718 22.44 radiation 1.0 270 < th dose dependent rect. 21 6
724 22.44 precipitation 0.1 270 < th dose dependent rect. 17 10
731 22.45 wind 9.0 270 < th dose independent rect. 21 6
732 22.45 temperature 30.0 30 < th dose independent rect. 9 8
734 22.45 precipitation 0.1 720 < th dose independent rect. 7 12
735 22.45 wind 1.0 30 > th dose independent rect. 17 16
746 22.45 precipitation 0.1 720 < th dose dependent rect. 7 12
749 22.46 wind 5.0 30 < th dose independent rect. 4 5
752 22.46 wind 1.0 10 > th dose independent rect. 9 8
754 22.46 humidity 50.0 270 > th dose independent rect. 17 14
761 22.46 wind 5.0 10 < th dose dependent rect. 6 3
776 22.47 temperature 10.0 30 > th dose independent rect. 4 5
778 22.47 temperature 30.0 30 < th dose independent rect. 4 5
779 22.47 humidity 50.0 30 > th dose independent rect. 4 5
781 22.47 atmosphere 995.0 30 > th dose independent rect. 4 5
782 22.47 atmosphere 1015.0 30 < th dose independent rect. 4 5
784 22.47 precipitation 0.1 30 < th dose independent rect. 4 5
793 22.47 wind 1.0 270 > th dose independent rect. 7 20
797 22.47 atmosphere 995.0 10 > th dose dependent rect. 6 3
798 22.47 precipitation 0.1 30 < th dose dependent rect. 4 5
799 22.47 wind 9.0 270 < th dose dependent rect. 21 6
824 22.48 temperature 10.0 30 > th dose dependent rect. 9 6
833 22.49 temperature 25.0 720 > th dose independent rect. 8 3
863 22.50 humidity 50.0 10 > th dose independent rect. 17 16
865 22.50 radiation 20.0 270 < th dose independent rect. 15 16
871 22.50 radiation 40.0 10 < th dose dependent rect. 6 3
875 22.50 atmosphere 995.0 10 > th dose dependent rect. 22 11
887 22.51 atmosphere 1015.0 270 < th dose dependent rect. 23 3
921 22.52 atmosphere 995.0 270 > th dose independent rect. 7 20
927 22.52 wind 9.0 30 < th dose dependent rect. 4 5
939 22.52 radiation 10.0 270 < th dose dependent rect. 13 14
969 22.54 wind 1.0 720 > th dose independent rect. 19 4
971 22.54 radiation 1.0 720 > th dose independent rect. 7 4
976 22.54 radiation 1.0 30 > th dose independent rect. 9 8
977 22.54 precipitation 0.1 270 < th dose independent rect. 7 8
980 22.54 wind 9.0 270 < th dose independent rect. 9 17
982 22.54 wind 9.0 270 < th dose independent rect. 7 20
991 22.54 precipitation 0.1 270 < th dose dependent rect. 7 8