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Os02g0224900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0179) R2 : 0.603
β1 : 0.717 (0.0671) R2dD : 0.109 R2D : -0.00193
β2 : 0.896 (0.0442) R2dC : 0.364 R2C : 0.286
β3 : 0.669 (0.0475) R2dE : 0.188 R2E : 0.0846
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.339 (0.0382) R2dN8 : 0.0926 R2N8 : 0.0648
σ : 0.334
deviance : 51.34
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C
peak time of C : 21.3
E
wheather : temperature
threshold : 29.78
memory length : 1237
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.39 0.334 12.8 0.193 0.882 0.396 0.143 2.44 0.268 21.3 29.78 1258 -- --
51.3 0.334 12.8 0.721 0.897 0.664 0.103 -- 0.341 21.3 29.79 1237 -- --
50.46 0.331 12.8 0.196 0.881 0.398 -- 2.39 0.269 21.3 29.75 1259 -- --
51.34 0.334 12.8 0.717 0.896 0.669 -- -- 0.339 21.3 29.78 1237 -- --
93.12 0.449 12.8 0.0945 -- 0.319 -- 2.75 0.254 -- 29.73 1453 -- --
73.17 0.401 12.7 0.509 0.843 -- -0.00129 -- 0.391 20.9 -- -- -- --
73.17 0.401 12.7 0.509 0.843 -- -- -- 0.391 20.9 -- -- -- --
94.39 0.452 12.7 0.727 -- 0.639 -- -- 0.295 -- 29.8 1468 -- --
64.4 0.374 12.8 -- 0.923 0.612 -- -- 0.351 21.2 29.44 1127 -- --
113.67 0.498 12.7 0.509 -- -- -- -- 0.385 -- -- -- -- --
79.99 0.418 12.8 -- 0.842 -- -- -- 0.334 20.9 -- -- -- --
106.92 0.482 12.7 -- -- 0.508 -- -- 0.296 -- 29.62 1460 -- --
120.49 0.512 12.7 -- -- -- -- -- 0.328 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.31 humidity 60.0 14400 < th dose dependent rect. 16 2
2 49.41 humidity 50.0 14400 > th dose independent rect. 16 19
4 49.48 humidity 60.0 14400 < th dose dependent rect. 16 17
10 49.77 humidity 70.0 14400 < th dose dependent rect. 17 15
50 50.06 humidity 50.0 14400 < th dose independent rect. 15 19
51 50.09 humidity 50.0 14400 > th dose independent rect. 15 12
52 50.09 humidity 50.0 14400 > th dose independent rect. 15 14
54 50.11 humidity 50.0 14400 > th dose independent rect. 15 4
57 50.11 humidity 50.0 14400 > th dose independent rect. 15 10
67 50.20 humidity 50.0 14400 < th dose independent rect. 15 3
86 50.72 humidity 60.0 14400 > th dose independent rect. 17 2
87 50.77 humidity 50.0 14400 < th dose independent sin 11 NA
88 50.82 humidity 60.0 14400 < th dose independent rect. 17 1
104 51.07 humidity 70.0 14400 < th dose dependent sin 12 NA
150 51.23 humidity 60.0 14400 < th dose independent sin 13 NA
153 51.26 precipitation 0.1 43200 > th dose dependent rect. 19 2
154 51.28 humidity 60.0 14400 > th dose independent rect. 17 12
156 51.29 humidity 60.0 14400 > th dose independent rect. 17 8
157 51.29 humidity 60.0 14400 > th dose independent rect. 17 10
167 51.34 temperature 30.0 1440 < th dose independent rect. 18 22
169 51.37 temperature 30.0 1440 < th dose independent rect. 9 7
170 51.38 temperature 30.0 1440 < th dose independent rect. 6 10
171 51.38 temperature 30.0 1440 < th dose independent rect. 3 13
186 51.44 temperature 30.0 1440 < th dose independent rect. 13 23
187 51.46 humidity 60.0 14400 > th dose independent sin 13 NA
196 51.54 temperature 30.0 1440 > th dose independent rect. 18 22
215 51.58 temperature 30.0 1440 < th dose independent sin 0 NA
217 51.58 temperature 30.0 1440 > th dose independent rect. 9 7
236 51.60 temperature 30.0 1440 > th dose independent rect. 14 22
255 51.63 temperature 30.0 1440 < th dose independent rect. 2 18
257 51.63 temperature 30.0 1440 < th dose independent rect. 9 20
260 51.63 temperature 30.0 1440 < th dose independent rect. 7 22
263 51.64 temperature 30.0 1440 < th dose independent no NA NA
363 51.65 humidity 50.0 14400 > th dose dependent rect. 17 1
366 51.66 temperature 30.0 1440 < th dose independent rect. 11 23
431 51.77 humidity 60.0 14400 > th dose independent rect. 12 8
444 51.78 temperature 30.0 1440 > th dose independent sin 23 NA
484 51.81 temperature 30.0 1440 > th dose independent no NA NA
601 51.83 temperature 30.0 1440 > th dose independent rect. 11 23
723 52.03 temperature 30.0 1440 < th dose independent rect. 13 7
725 52.03 temperature 30.0 1440 < th dose independent rect. 13 14
746 52.08 temperature 30.0 1440 > th dose independent rect. 13 6
762 52.09 humidity 60.0 14400 < th dose independent rect. 12 8
808 52.13 precipitation 0.1 43200 > th dose dependent rect. 17 4
809 52.14 temperature 30.0 1440 > th dose independent rect. 14 4
896 52.25 temperature 30.0 1440 > th dose independent rect. 11 1
900 52.28 temperature 30.0 1440 < th dose independent rect. 15 2
901 52.28 humidity 70.0 1440 > th dose independent rect. 16 20
905 52.29 temperature 30.0 1440 > th dose independent rect. 15 2
935 52.31 precipitation 0.1 43200 > th dose dependent rect. 16 2
942 52.34 humidity 60.0 14400 > th dose independent rect. 12 3
945 52.35 temperature 30.0 1440 < th dose independent rect. 9 3
962 52.36 temperature 30.0 1440 < th dose independent rect. 11 1
982 52.43 radiation 30.0 1440 < th dose independent rect. 15 18
989 52.46 humidity 60.0 1440 > th dose dependent rect. 11 1