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Os02g0209100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0165) R2 : 0.102
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.25 (0.0347) R2dN8 : 0.132 R2N8 : 0.102
σ : 0.311
deviance : 44.26
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.6 0.251 12.5 0.0393 0.352 0.211 -0.189 -1.11 0.183 23.1 19.5 1797 -- --
29.82 0.254 12.5 0.122 0.37 0.479 -0.17 -- 0.201 23 18.6 2869 -- --
28.72 0.25 12.5 0.0481 0.351 0.204 -- -1.11 0.185 23 19.31 1868 -- --
29.87 0.255 12.5 0.124 0.35 0.499 -- -- 0.202 22.8 18.4 2784 -- --
35.67 0.278 12.5 0.0179 -- 0.249 -- -0.963 0.171 -- 19.13 2442 -- --
33.07 0.27 12.4 0.347 0.349 -- -0.172 -- 0.287 23 -- -- -- --
33.19 0.27 12.4 0.355 0.35 -- -- -- 0.288 23 -- -- -- --
36.81 0.283 12.4 0.125 -- 0.513 -- -- 0.198 -- 18.42 2377 -- --
30.2 0.256 12.5 -- 0.33 0.543 -- -- 0.177 22.7 18.59 2774 -- --
40.8 0.298 12.4 0.362 -- -- -- -- 0.291 -- -- -- -- --
36.5 0.283 12.4 -- 0.353 -- -- -- 0.248 23.1 -- -- -- --
37.11 0.284 12.5 -- -- 0.587 -- -- 0.17 -- 18.6 2393 -- --
44.26 0.311 12.4 -- -- -- -- -- 0.25 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.27 radiation 1.0 1440 < th dose independent rect. 13 1
2 26.27 radiation 1.0 1440 < th dose dependent rect. 13 1
3 26.31 radiation 1.0 1440 < th dose independent rect. 11 1
4 26.31 radiation 1.0 1440 < th dose dependent rect. 11 1
5 26.43 radiation 1.0 1440 < th dose independent rect. 11 3
7 26.43 radiation 1.0 1440 < th dose dependent rect. 11 3
17 26.64 radiation 1.0 1440 > th dose independent rect. 13 1
20 26.65 radiation 1.0 1440 > th dose independent rect. 11 3
27 26.70 radiation 20.0 1440 < th dose independent rect. 11 2
28 26.71 temperature 20.0 30 > th dose independent rect. 20 10
32 26.79 radiation 1.0 1440 > th dose independent rect. 11 1
59 27.15 radiation 20.0 1440 < th dose dependent rect. 11 2
78 27.72 temperature 20.0 30 > th dose independent rect. 20 8
88 28.02 humidity 70.0 14400 < th dose dependent rect. 21 1
105 28.18 precipitation 0.1 270 > th dose dependent rect. 2 2
106 28.19 precipitation 0.1 270 > th dose independent rect. 2 2
108 28.21 radiation 1.0 1440 > th dose independent rect. 9 1
110 28.23 atmosphere 1005.0 720 < th dose independent rect. 19 6
116 28.32 temperature 20.0 1440 > th dose independent rect. 6 1
123 28.35 radiation 1.0 1440 > th dose dependent rect. 12 1
124 28.37 atmosphere 1005.0 270 > th dose dependent rect. 23 9
130 28.40 temperature 20.0 90 > th dose independent sin 12 NA
132 28.41 wind 1.0 720 < th dose independent rect. 23 1
137 28.43 temperature 20.0 270 > th dose independent sin 14 NA
146 28.47 atmosphere 1005.0 10 < th dose dependent rect. 24 8
150 28.51 atmosphere 1005.0 720 < th dose independent rect. 20 1
160 28.52 atmosphere 1005.0 90 < th dose dependent rect. 24 9
175 28.59 temperature 20.0 1440 < th dose independent rect. 5 2
176 28.59 temperature 20.0 4320 > th dose independent rect. 18 6
193 28.68 temperature 20.0 4320 < th dose independent rect. 18 6
218 28.75 temperature 20.0 1440 > th dose independent rect. 20 8
221 28.76 temperature 20.0 90 < th dose independent sin 13 NA
223 28.76 temperature 20.0 1440 < th dose independent rect. 20 8
226 28.77 temperature 20.0 1440 < th dose independent rect. 21 4
230 28.78 humidity 50.0 43200 < th dose independent rect. 7 1
231 28.78 atmosphere 1005.0 720 > th dose independent rect. 23 1
247 28.79 temperature 20.0 1440 > th dose independent rect. 20 11
248 28.79 temperature 20.0 1440 < th dose independent rect. 20 11
258 28.80 atmosphere 1005.0 90 > th dose dependent rect. 23 12
274 28.82 temperature 20.0 1440 > th dose independent rect. 12 19
275 28.83 temperature 20.0 1440 > th dose independent sin 12 NA
283 28.84 temperature 20.0 1440 < th dose independent sin 12 NA
294 28.84 temperature 20.0 1440 > th dose independent rect. 15 16
296 28.84 temperature 20.0 1440 < th dose independent rect. 12 19
319 28.86 temperature 20.0 1440 < th dose independent rect. 15 16
325 28.87 temperature 20.0 1440 > th dose independent rect. 23 1
334 28.87 radiation 20.0 1440 < th dose independent rect. 11 11
342 28.87 radiation 20.0 1440 < th dose independent rect. 11 16
349 28.88 humidity 60.0 14400 > th dose independent rect. 7 1
360 28.88 temperature 20.0 1440 > th dose independent rect. 21 18
365 28.89 temperature 20.0 1440 < th dose independent rect. 23 1
400 28.90 temperature 20.0 1440 < th dose independent rect. 21 18
432 28.91 temperature 20.0 30 > th dose independent rect. 20 21
461 28.93 atmosphere 1005.0 720 < th dose independent rect. 23 1
486 28.94 humidity 90.0 14400 > th dose independent rect. 5 2
497 28.94 humidity 50.0 43200 < th dose independent rect. 20 13
530 28.95 humidity 50.0 43200 < th dose dependent rect. 7 1
540 28.96 temperature 20.0 90 < th dose independent rect. 17 12
547 28.96 temperature 20.0 30 > th dose independent rect. 12 18
558 28.97 atmosphere 1005.0 720 > th dose independent rect. 21 3
653 29.00 temperature 15.0 30 > th dose dependent rect. 20 10
716 29.03 radiation 20.0 4320 < th dose independent rect. 17 13
733 29.04 humidity 70.0 14400 < th dose independent rect. 21 1
804 29.07 temperature 20.0 90 < th dose independent rect. 19 10
835 29.08 humidity 50.0 43200 < th dose dependent rect. 20 13
842 29.09 temperature 20.0 270 < th dose independent rect. 16 10
876 29.10 temperature 20.0 30 > th dose independent rect. 20 19
903 29.11 humidity 90.0 14400 > th dose dependent rect. 6 1
918 29.12 humidity 50.0 43200 > th dose independent rect. 21 12
961 29.13 temperature 20.0 1440 > th dose independent rect. 5 23
983 29.14 radiation 10.0 4320 > th dose dependent rect. 17 14
992 29.15 temperature 20.0 30 > th dose independent rect. 12 16
999 29.16 temperature 20.0 1440 > th dose independent no NA NA