Os02g0208900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ZIGA2 protein (Fragment).
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Os02g0208900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ZIGA2 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.37 | 0.267 | 8.37 | 0.889 | 0.49 | 0.289 | -0.581 | -1.87 | 0.466 | 11.9 | 91.4 | 237 | -- | -- |
| 36.27 | 0.281 | 8.37 | 0.782 | 0.462 | 0.513 | -0.249 | -- | 0.425 | 12 | 94.78 | 319 | -- | -- |
| 32.05 | 0.264 | 8.35 | 0.909 | 0.476 | 0.339 | -- | -2.21 | 0.501 | 11.9 | 92.91 | 344 | -- | -- |
| 36.44 | 0.281 | 8.37 | 0.841 | 0.467 | 0.778 | -- | -- | 0.433 | 12.1 | 94.88 | 298 | -- | -- |
| 45.16 | 0.313 | 8.37 | 0.91 | -- | 0.483 | -- | -2.01 | 0.483 | -- | 93 | 464 | -- | -- |
| 37.9 | 0.289 | 8.37 | 0.861 | 0.476 | -- | -0.513 | -- | 0.416 | 11.2 | -- | -- | -- | -- |
| 38.87 | 0.292 | 8.37 | 0.842 | 0.48 | -- | -- | -- | 0.415 | 11.6 | -- | -- | -- | -- |
| 46.34 | 0.317 | 8.37 | 0.804 | -- | 0.546 | -- | -- | 0.465 | -- | 76 | 904 | -- | -- |
| 55 | 0.345 | 8.38 | -- | 0.467 | 0.74 | -- | -- | 0.359 | 12.3 | 94.56 | 295 | -- | -- |
| 53.36 | 0.341 | 8.38 | 0.828 | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
| 57.56 | 0.355 | 8.39 | -- | 0.471 | -- | -- | -- | 0.321 | 11.5 | -- | -- | -- | -- |
| 62.43 | 0.368 | 8.38 | -- | -- | 0.614 | -- | -- | 0.412 | -- | 83.7 | 890 | -- | -- |
| 71.46 | 0.395 | 8.4 | -- | -- | -- | -- | -- | 0.318 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 30.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 31.25 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 6 | 31.71 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 7 | 31.79 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 8 | 31.87 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 9 | 31.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 44 | 32.09 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 56 | 32.15 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 10 |
| 64 | 32.19 | humidity | 90.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 79 | 32.28 | wind | 1.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 81 | 32.29 | wind | 1.0 | 720 | > th | dose independent | rect. | 9 | 18 |
| 105 | 32.38 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 111 | 32.40 | wind | 1.0 | 720 | > th | dose independent | sin | 17 | NA |
| 112 | 32.40 | wind | 1.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 145 | 32.55 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 9 | 22 |
| 146 | 32.56 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 11 |
| 147 | 32.56 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 20 |
| 151 | 32.57 | temperature | 20.0 | 90 | > th | dose independent | rect. | 22 | 11 |
| 162 | 32.60 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 12 | 21 |
| 210 | 32.70 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 216 | 32.71 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 218 | 32.71 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 231 | 32.73 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 236 | 32.75 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 13 |
| 238 | 32.76 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 241 | 32.79 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 257 | 32.84 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 20 | 10 |
| 275 | 32.91 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 10 |
| 277 | 32.92 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 279 | 32.93 | wind | 1.0 | 720 | > th | dose independent | rect. | 17 | 8 |
| 283 | 32.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 2 |
| 285 | 32.94 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 287 | 32.95 | wind | 9.0 | 720 | < th | dose dependent | rect. | 15 | 5 |
| 303 | 33.00 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 317 | 33.02 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 4 |
| 328 | 33.04 | wind | 9.0 | 720 | < th | dose dependent | rect. | 13 | 7 |
| 346 | 33.06 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 352 | 33.08 | wind | 9.0 | 720 | < th | dose dependent | sin | 18 | NA |
| 365 | 33.10 | wind | 1.0 | 720 | > th | dose independent | rect. | 23 | 21 |
| 377 | 33.11 | wind | 9.0 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 380 | 33.12 | temperature | 20.0 | 10 | > th | dose independent | sin | 8 | NA |
| 385 | 33.12 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 388 | 33.13 | humidity | 90.0 | 270 | > th | dose independent | rect. | 20 | 13 |
| 406 | 33.16 | wind | 9.0 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 429 | 33.20 | humidity | 90.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 439 | 33.21 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 449 | 33.22 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 464 | 33.23 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 11 |
| 471 | 33.25 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 486 | 33.27 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 497 | 33.28 | wind | 9.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 505 | 33.29 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 512 | 33.30 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 13 |
| 578 | 33.37 | wind | 5.0 | 720 | < th | dose independent | sin | 15 | NA |
| 586 | 33.38 | humidity | 90.0 | 270 | > th | dose independent | sin | 9 | NA |
| 601 | 33.39 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 10 |
| 622 | 33.40 | wind | 1.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 655 | 33.42 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 657 | 33.42 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 698 | 33.45 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 22 | 12 |
| 709 | 33.46 | humidity | 70.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 720 | 33.47 | wind | 5.0 | 270 | < th | dose independent | sin | 10 | NA |
| 731 | 33.47 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 13 |
| 739 | 33.48 | humidity | 60.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 767 | 33.49 | wind | 3.0 | 720 | < th | dose dependent | rect. | 23 | 2 |
| 832 | 33.52 | wind | 1.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 900 | 33.55 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 22 | 11 |
| 904 | 33.56 | wind | 1.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 906 | 33.56 | temperature | 30.0 | 720 | < th | dose independent | rect. | 8 | 6 |
| 918 | 33.56 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 924 | 33.57 | wind | 3.0 | 720 | > th | dose independent | rect. | 8 | 9 |
| 944 | 33.57 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 953 | 33.58 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 981 | 33.59 | radiation | 1.0 | 720 | > th | dose independent | rect. | 8 | 11 |