Os02g0205400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os02g0205400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.75 | 0.229 | 9.83 | 0.32 | 0.165 | -0.302 | -0.56 | 1.34 | -0.0782 | 22.6 | 24.72 | 852 | -- | -- |
| 24.41 | 0.23 | 9.79 | 0.495 | 0.193 | -0.515 | -0.759 | -- | 0.0167 | 21.9 | 19.35 | 2397 | -- | -- |
| 24.8 | 0.232 | 9.84 | 0.244 | 0.16 | -0.271 | -- | 1.81 | -0.102 | 22.8 | 25.99 | 828 | -- | -- |
| 26.3 | 0.239 | 9.8 | 0.453 | 0.186 | -0.832 | -- | -- | -0.0316 | 22.4 | 18.66 | 2382 | -- | -- |
| 26.26 | 0.239 | 9.84 | 0.23 | -- | -0.348 | -- | 1.87 | -0.117 | -- | 26.46 | 802 | -- | -- |
| 28.64 | 0.251 | 9.78 | 0.661 | 0.209 | -- | -0.863 | -- | 0.0547 | 22.7 | -- | -- | -- | -- |
| 31.74 | 0.264 | 9.78 | 0.696 | 0.213 | -- | -- | -- | 0.0572 | 22.8 | -- | -- | -- | -- |
| 28.43 | 0.248 | 9.79 | 0.45 | -- | -0.869 | -- | -- | -0.0299 | -- | 18.71 | 2357 | -- | -- |
| 29.12 | 0.251 | 9.82 | -- | 0.205 | -1.05 | -- | -- | -0.125 | 22.2 | 19.94 | 7950 | -- | -- |
| 34.54 | 0.275 | 9.77 | 0.7 | -- | -- | -- | -- | 0.0585 | -- | -- | -- | -- | -- |
| 44.5 | 0.312 | 9.8 | -- | 0.219 | -- | -- | -- | -0.0203 | 23 | -- | -- | -- | -- |
| 31.54 | 0.262 | 9.82 | -- | -- | -1.06 | -- | -- | -0.129 | -- | 19.98 | 7947 | -- | -- |
| 47.48 | 0.322 | 9.79 | -- | -- | -- | -- | -- | -0.0192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.92 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 4 | 23.15 | wind | 7 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 5 | 23.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 12 |
| 6 | 23.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 10 |
| 10 | 23.21 | wind | 9 | 43200 | > th | dose dependent | sin | 15 | NA |
| 11 | 23.24 | wind | 9 | 43200 | < th | dose independent | sin | 15 | NA |
| 15 | 23.27 | wind | 7 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 17 | 23.28 | wind | 9 | 43200 | > th | dose independent | sin | 15 | NA |
| 18 | 23.28 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 19 | 23.28 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 20 | 23.28 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 22 | 23.28 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 23 | 23.29 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 24 | 23.30 | wind | 7 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 41 | 23.34 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 43 | 23.34 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 48 | 23.37 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 53 | 23.37 | wind | 9 | 43200 | < th | dose independent | rect. | 12 | 20 |
| 56 | 23.38 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 60 | 23.38 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 67 | 23.40 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 14 |
| 82 | 23.43 | wind | 9 | 43200 | > th | dose independent | rect. | 12 | 20 |
| 107 | 23.47 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 111 | 23.47 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 141 | 23.52 | temperature | 15 | 30 | > th | dose dependent | rect. | 6 | 18 |
| 143 | 23.53 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 168 | 23.57 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 192 | 23.62 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 196 | 23.62 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 9 |
| 208 | 23.64 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 238 | 23.68 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 263 | 23.70 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 303 | 23.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 320 | 23.76 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 19 |
| 342 | 23.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 343 | 23.78 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 432 | 23.82 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 440 | 23.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 452 | 23.83 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 481 | 23.85 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 493 | 23.86 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 530 | 23.88 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 19 |
| 533 | 23.88 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 543 | 23.89 | wind | 9 | 43200 | < th | dose independent | no | NA | NA |
| 548 | 23.89 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 553 | 23.89 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 557 | 23.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 564 | 23.90 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 14 |
| 590 | 23.91 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 666 | 23.94 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 669 | 23.94 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 8 |
| 692 | 23.95 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 693 | 23.95 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 6 |
| 696 | 23.95 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 9 |
| 751 | 23.97 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 17 |
| 763 | 23.98 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 772 | 23.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 798 | 24.00 | wind | 9 | 43200 | > th | dose independent | no | NA | NA |
| 800 | 24.00 | humidity | 60 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 819 | 24.00 | humidity | 50 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 838 | 24.01 | humidity | 60 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 840 | 24.01 | humidity | 60 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 842 | 24.01 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 879 | 24.02 | humidity | 60 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 900 | 24.02 | wind | 9 | 43200 | > th | dose independent | rect. | 22 | 23 |
| 904 | 24.02 | humidity | 50 | 43200 | < th | dose dependent | sin | 12 | NA |
| 905 | 24.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 906 | 24.02 | humidity | 70 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 922 | 24.02 | humidity | 50 | 43200 | < th | dose dependent | rect. | 14 | 18 |
| 927 | 24.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 931 | 24.03 | humidity | 60 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 969 | 24.03 | wind | 7 | 43200 | > th | dose dependent | rect. | 4 | 19 |
| 996 | 24.04 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 18 |