Os02g0196800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fumarylacetoacetase (Fragment).
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Os02g0196800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fumarylacetoacetase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.7 | 0.328 | 11.1 | -1.87 | 0.555 | -0.954 | -0.0466 | 0.357 | -0.509 | 12.9 | 23.55 | 745 | -- | -- |
| 48.85 | 0.326 | 11.1 | -1.83 | 0.548 | -1.01 | 0.0101 | -- | -0.498 | 13 | 23.38 | 789 | -- | -- |
| 48.71 | 0.325 | 11.1 | -1.87 | 0.554 | -0.954 | -- | 0.345 | -0.509 | 12.9 | 23.54 | 745 | -- | -- |
| 48.84 | 0.325 | 11.1 | -1.83 | 0.558 | -1.02 | -- | -- | -0.503 | 13 | 23.4 | 779 | -- | -- |
| 51.78 | 0.335 | 11.1 | -1.9 | -- | -1.31 | -- | 0.659 | -0.535 | -- | 48.83 | 12 | -- | -- |
| 62.4 | 0.37 | 11 | -1.55 | 0.473 | -- | 0.0411 | -- | -0.325 | 13.5 | -- | -- | -- | -- |
| 62.41 | 0.37 | 11 | -1.55 | 0.473 | -- | -- | -- | -0.325 | 13.5 | -- | -- | -- | -- |
| 52.07 | 0.336 | 11.1 | -1.8 | -- | -1.29 | -- | -- | -0.508 | -- | 35.63 | 2 | -- | -- |
| 125.07 | 0.524 | 11 | -- | 0.429 | -0.259 | -- | -- | -0.183 | 13.5 | 43.84 | 22 | -- | -- |
| 76.15 | 0.408 | 11 | -1.57 | -- | -- | -- | -- | -0.335 | -- | -- | -- | -- | -- |
| 125.78 | 0.525 | 11 | -- | 0.501 | -- | -- | -- | -0.152 | 13.6 | -- | -- | -- | -- |
| 133.03 | 0.539 | 11 | -- | -- | -0.727 | -- | -- | -0.243 | -- | 43.84 | 22 | -- | -- |
| 141.13 | 0.554 | 11 | -- | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 12 |
| 4 | 44.27 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 9 | 44.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 29 | 44.77 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 55 | 45.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 109 | 45.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 156 | 45.95 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 13 |
| 221 | 46.35 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 242 | 46.47 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 18 |
| 266 | 46.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 366 | 47.17 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 390 | 47.27 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 406 | 47.33 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 440 | 47.46 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 455 | 47.53 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 14 |
| 464 | 47.56 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 487 | 47.62 | humidity | 50 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 497 | 47.65 | humidity | 50 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 503 | 47.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 521 | 47.75 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 564 | 47.86 | radiation | 1 | 720 | < th | dose independent | rect. | 10 | 1 |
| 567 | 47.86 | radiation | 1 | 720 | < th | dose dependent | rect. | 10 | 1 |
| 574 | 47.89 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 579 | 47.89 | humidity | 70 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 583 | 47.90 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 585 | 47.90 | humidity | 70 | 14400 | > th | dose dependent | rect. | 18 | 8 |
| 592 | 47.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 617 | 47.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 641 | 48.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 649 | 48.06 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 653 | 48.08 | temperature | 20 | 720 | < th | dose independent | sin | 5 | NA |
| 658 | 48.08 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 662 | 48.11 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 674 | 48.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 693 | 48.18 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 734 | 48.26 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 756 | 48.30 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 772 | 48.32 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 773 | 48.32 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 9 |
| 800 | 48.37 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 7 |
| 801 | 48.37 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 817 | 48.40 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 823 | 48.40 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 829 | 48.41 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 10 | 5 |
| 831 | 48.41 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 905 | 48.49 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 907 | 48.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 932 | 48.51 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 986 | 48.57 | temperature | 15 | 30 | > th | dose dependent | rect. | 6 | 16 |