Os02g0193900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0193900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.48 | 0.179 | 11.2 | 0.486 | 0.451 | 0.494 | -0.0936 | 0.215 | 0.313 | 22.8 | 23.77 | 8268 | -- | -- |
| 14.51 | 0.177 | 11.2 | 0.559 | 0.445 | 0.495 | -0.0924 | -- | 0.338 | 22.8 | 23.9 | 8307 | -- | -- |
| 14.51 | 0.177 | 11.2 | 0.496 | 0.451 | 0.494 | -- | 0.192 | 0.317 | 22.8 | 23.8 | 8301 | -- | -- |
| 14.55 | 0.178 | 11.2 | 0.562 | 0.449 | 0.498 | -- | -- | 0.338 | 22.8 | 23.88 | 8307 | -- | -- |
| 26.56 | 0.24 | 11.2 | 0.481 | -- | 0.475 | -- | 0.222 | 0.313 | -- | 23.9 | 8821 | -- | -- |
| 22.96 | 0.225 | 11.3 | 0.288 | 0.426 | -- | -0.14 | -- | 0.121 | 22.5 | -- | -- | -- | -- |
| 23.04 | 0.225 | 11.3 | 0.293 | 0.427 | -- | -- | -- | 0.122 | 22.5 | -- | -- | -- | -- |
| 26.59 | 0.24 | 11.2 | 0.57 | -- | 0.487 | -- | -- | 0.343 | -- | 23.83 | 8821 | -- | -- |
| 21.29 | 0.215 | 11.2 | -- | 0.455 | 0.308 | -- | -- | 0.169 | 22.7 | 26.52 | 7034 | -- | -- |
| 34.22 | 0.273 | 11.2 | 0.301 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 25.31 | 0.235 | 11.3 | -- | 0.429 | -- | -- | -- | 0.089 | 22.6 | -- | -- | -- | -- |
| 31.12 | 0.261 | 11.2 | -- | -- | 0.304 | -- | -- | 0.102 | -- | 29.2 | 8800 | -- | -- |
| 36.61 | 0.282 | 11.3 | -- | -- | -- | -- | -- | 0.0901 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.67 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 21 |
| 10 | 14.04 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 16 | 14.15 | temperature | 20.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 25 | 14.29 | temperature | 10.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 29 | 14.36 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 53 | 14.63 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 55 | 14.64 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 62 | 14.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 65 | 14.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 66 | 14.76 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 67 | 14.76 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 68 | 14.76 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 69 | 14.77 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 70 | 14.78 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 72 | 14.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 73 | 14.79 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 93 | 14.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 101 | 14.89 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 107 | 14.92 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 118 | 14.94 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 221 | 15.07 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 288 | 15.13 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 20 |
| 296 | 15.14 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 301 | 15.14 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 313 | 15.15 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 375 | 15.17 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 10 |
| 402 | 15.18 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 409 | 15.18 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 19 |
| 451 | 15.20 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 452 | 15.20 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 487 | 15.21 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 519 | 15.21 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 21 |
| 529 | 15.22 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 550 | 15.22 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 576 | 15.23 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 598 | 15.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 605 | 15.23 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 15 |
| 616 | 15.23 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 18 |
| 639 | 15.23 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 641 | 15.24 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 646 | 15.24 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 647 | 15.24 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 735 | 15.26 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 785 | 15.27 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 902 | 15.29 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 1 |