FiT-DB / Search/ Help/ Sample detail

Os02g0193100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.74 (0.0348) R2 : 0.765
β1 : 3.5 (0.127) R2dD : 0.407 R2D : 0.321
β2 : 3.76 (0.176) R2dC : 1.08 R2C : -1.16
β3 : -4.07 (0.161) R2dE : 1.5 R2E : -0.783
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.942 (0.074) R2dN8 : 0.112 R2N8 : 0.0253
σ : 0.647
deviance : 193.27
__
_____
C
peak time of C : 0.55
E
wheather : radiation
threshold : 0.59
memory length : 251
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 5.16
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
192.98 0.653 7.74 3.5 3.77 -4.09 0.065 -0.382 0.944 0.568 0.6436 252 5.16 --
193.02 0.647 7.74 3.5 3.79 -4.11 -0.252 -- 0.95 0.576 0.5812 253 5.18 --
192.8 0.647 7.75 3.49 3.75 -4.06 -- -0.328 0.941 0.544 0.58 251 5.17 --
193.27 0.647 7.74 3.5 3.76 -4.07 -- -- 0.942 0.55 0.59 251 5.16 --
244.29 0.728 7.65 3.45 -- -2.63 -- -1.82 1.17 -- 0.5103 790 6.5 --
255.96 0.75 7.71 3.58 2 -- 0.53 -- 1.05 18.1 -- -- -- --
256.65 0.75 7.71 3.57 2.01 -- -- -- 1.05 18.1 -- -- -- --
238.51 0.719 7.63 3.52 -- -2.51 -- -- 1.09 -- 0.53 805 6.43 --
525.04 1.07 7.74 -- 4.35 -4.49 -- -- 0.9 0.645 0.55 252 5.49 --
465.28 1.01 7.67 3.52 -- -- -- -- 1.01 -- -- -- -- --
593.33 1.14 7.8 -- 1.96 -- -- -- 0.654 18.2 -- -- -- --
572.26 1.11 7.63 -- -- -2.67 -- -- 1.09 -- 1.71e-05 836 6.6 --
791.67 1.31 7.76 -- -- -- -- -- 0.618 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 192.73 temperature 20.0 270 > th dose dependent rect. 5 2
3 194.93 radiation 1.0 270 > th dose independent rect. 18 13
4 195.94 radiation 1.0 270 < th dose dependent sin 11 NA
6 196.73 temperature 20.0 270 > th dose independent rect. 5 2
7 196.90 temperature 15.0 270 > th dose dependent rect. 4 5
13 197.97 temperature 10.0 270 > th dose dependent rect. 16 17
20 199.24 radiation 1.0 270 > th dose independent rect. 5 2
21 199.66 radiation 1.0 270 < th dose independent sin 11 NA
32 199.85 radiation 1.0 270 > th dose independent sin 11 NA
34 200.15 radiation 1.0 90 < th dose dependent sin 9 NA
36 200.81 radiation 1.0 90 < th dose independent sin 9 NA
43 201.06 radiation 1.0 90 > th dose independent sin 9 NA
48 202.10 temperature 20.0 270 > th dose independent rect. 4 5
49 202.45 temperature 25.0 10 > th dose independent rect. 5 5
61 203.51 temperature 20.0 10 > th dose dependent rect. 18 16
77 204.22 radiation 1.0 270 < th dose dependent rect. 18 13
92 205.15 radiation 10.0 10 < th dose independent rect. 6 21
99 205.31 radiation 1.0 270 < th dose dependent rect. 18 15
101 205.60 radiation 1.0 90 > th dose independent rect. 18 17
104 205.68 temperature 20.0 10 > th dose dependent sin 8 NA
114 206.12 temperature 20.0 10 > th dose dependent rect. 23 11
116 206.19 wind 3.0 270 < th dose independent rect. 5 2
124 206.36 wind 7.0 10 < th dose dependent rect. 6 4
142 207.09 radiation 1.0 90 < th dose independent rect. 20 11
146 207.23 wind 9.0 90 < th dose dependent rect. 5 6
147 207.26 wind 5.0 270 < th dose independent rect. 4 5
150 207.40 temperature 30.0 10 < th dose dependent rect. 20 10
164 207.84 humidity 70.0 270 > th dose independent rect. 18 11
165 207.85 radiation 1.0 90 > th dose independent rect. 5 6
196 208.03 wind 5.0 10 < th dose independent rect. 6 4
197 208.07 radiation 1.0 90 < th dose dependent rect. 20 11
200 208.12 radiation 20.0 10 < th dose dependent rect. 6 21
209 208.55 wind 7.0 270 < th dose dependent rect. 5 2
213 208.65 radiation 1.0 90 < th dose dependent rect. 20 15
230 208.97 radiation 10.0 10 < th dose independent rect. 6 19
241 209.32 radiation 1.0 90 < th dose independent rect. 20 15
242 209.33 temperature 30.0 270 < th dose independent rect. 18 11
255 209.54 temperature 25.0 90 > th dose independent rect. 16 18
267 209.78 humidity 50.0 90 > th dose independent rect. 5 6
272 209.90 humidity 50.0 90 > th dose dependent rect. 20 9
300 210.31 temperature 10.0 10 > th dose dependent sin 8 NA
310 210.51 humidity 50.0 10 > th dose dependent rect. 20 10
312 210.57 precipitation 0.1 90 < th dose independent rect. 5 6
313 210.57 precipitation 0.1 90 < th dose dependent rect. 5 6
317 210.60 atmosphere 995.0 90 > th dose independent rect. 5 6
318 210.60 atmosphere 1015.0 90 < th dose independent rect. 5 6
320 210.60 temperature 10.0 90 > th dose independent rect. 11 18
322 210.65 humidity 80.0 270 > th dose independent rect. 5 2
325 210.77 radiation 20.0 270 < th dose independent rect. 5 2
333 210.90 humidity 90.0 10 < th dose independent rect. 6 4
339 211.06 precipitation 0.1 270 < th dose independent rect. 5 2
340 211.06 precipitation 0.1 270 < th dose dependent rect. 5 2
346 211.14 temperature 10.0 270 > th dose independent rect. 5 2
348 211.14 temperature 30.0 270 < th dose independent rect. 5 2
349 211.14 humidity 50.0 270 > th dose independent rect. 5 2
351 211.14 atmosphere 995.0 270 > th dose independent rect. 5 2
352 211.14 atmosphere 1015.0 270 < th dose independent rect. 5 2
355 211.14 temperature 10.0 270 > th dose independent rect. 7 22
372 211.53 wind 9.0 90 < th dose dependent rect. 5 15
376 211.61 radiation 1.0 270 < th dose independent rect. 18 11
408 212.04 temperature 10.0 270 > th dose dependent rect. 21 12
425 212.22 wind 9.0 90 < th dose independent rect. 11 18
430 212.29 radiation 20.0 10 < th dose dependent rect. 6 19
436 212.35 temperature 10.0 270 > th dose dependent rect. 15 9
455 212.64 radiation 40.0 270 < th dose dependent rect. 5 2
456 212.64 radiation 20.0 10 < th dose dependent rect. 20 10
483 212.75 temperature 30.0 10 < th dose dependent sin 8 NA
515 213.05 temperature 10.0 90 > th dose dependent rect. 5 22
517 213.06 temperature 15.0 10 > th dose dependent rect. 5 7
522 213.09 radiation 10.0 270 > th dose independent rect. 9 6
529 213.15 precipitation 0.1 10 < th dose independent rect. 6 14
531 213.15 precipitation 0.1 10 < th dose dependent rect. 6 14
539 213.16 temperature 10.0 270 > th dose independent rect. 9 19
542 213.18 temperature 10.0 10 > th dose independent rect. 6 4
544 213.18 humidity 50.0 10 > th dose independent rect. 6 4
545 213.18 atmosphere 995.0 10 > th dose independent rect. 6 4
546 213.18 atmosphere 1015.0 10 < th dose independent rect. 6 4
547 213.18 temperature 10.0 10 > th dose independent rect. 10 20
553 213.23 precipitation 0.1 10 < th dose independent rect. 6 4
554 213.23 precipitation 0.1 10 < th dose dependent rect. 6 4
564 213.31 humidity 50.0 270 > th dose dependent rect. 5 2
582 213.42 wind 9.0 10 < th dose independent rect. 6 14
590 213.50 humidity 70.0 43200 < th dose dependent rect. 2 7
599 213.56 humidity 70.0 43200 < th dose dependent rect. 6 3
603 213.60 humidity 70.0 43200 < th dose dependent rect. 4 5
613 213.71 precipitation 0.1 90 < th dose independent rect. 11 18
618 213.71 precipitation 0.1 90 < th dose dependent rect. 11 18
620 213.73 wind 1.0 14400 < th dose dependent rect. 22 11
630 213.82 radiation 40.0 90 < th dose independent rect. 5 6
631 213.82 wind 9.0 270 < th dose independent rect. 5 14
642 213.94 humidity 70.0 43200 < th dose independent rect. 7 1
647 214.00 humidity 70.0 43200 < th dose independent rect. 4 4
663 214.07 temperature 20.0 14400 < th dose independent rect. 6 1
677 214.14 wind 1.0 14400 < th dose dependent rect. 22 9
683 214.17 wind 1.0 14400 < th dose dependent rect. 23 6
685 214.22 temperature 20.0 14400 > th dose independent rect. 6 1
700 214.31 temperature 20.0 14400 < th dose dependent rect. 2 12
701 214.32 wind 9.0 270 < th dose independent rect. 7 22
705 214.33 temperature 30.0 270 < th dose independent rect. 4 5
715 214.37 wind 9.0 10 < th dose independent rect. 20 10
716 214.37 temperature 20.0 14400 < th dose dependent rect. 5 3
719 214.38 humidity 60.0 43200 > th dose independent rect. 2 8
722 214.39 temperature 20.0 14400 < th dose dependent rect. 6 1
725 214.40 temperature 10.0 10 > th dose independent rect. 20 10
726 214.40 temperature 30.0 10 < th dose independent rect. 20 10
727 214.40 humidity 50.0 10 > th dose independent rect. 20 10
730 214.40 atmosphere 995.0 10 > th dose independent rect. 20 10
731 214.40 radiation 20.0 10 < th dose independent rect. 20 10
734 214.40 temperature 10.0 10 > th dose independent rect. 6 14
736 214.40 atmosphere 1015.0 10 < th dose independent rect. 6 14
743 214.43 radiation 1.0 10 > th dose independent rect. 6 4
744 214.43 wind 9.0 10 < th dose independent rect. 10 20
749 214.44 temperature 20.0 14400 < th dose dependent sin 4 NA
786 214.55 atmosphere 995.0 90 > th dose independent rect. 11 18
803 214.61 temperature 10.0 1440 > th dose independent rect. 7 4
806 214.61 atmosphere 995.0 1440 > th dose independent rect. 7 4
807 214.61 temperature 10.0 1440 > th dose independent rect. 11 20
814 214.64 temperature 25.0 14400 < th dose independent rect. 10 1
819 214.65 wind 7.0 270 < th dose independent rect. 15 18
856 214.75 humidity 60.0 43200 > th dose independent rect. 6 4
865 214.78 humidity 60.0 43200 < th dose dependent rect. 9 1
874 214.81 temperature 25.0 14400 > th dose independent rect. 10 1
929 215.03 wind 9.0 270 < th dose independent rect. 9 19
938 215.06 precipitation 0.1 270 < th dose independent rect. 5 14
941 215.06 precipitation 0.1 270 < th dose dependent rect. 5 14
979 215.19 radiation 1.0 14400 > th dose independent rect. 9 1
992 215.22 temperature 10.0 90 > th dose dependent rect. 5 20