Os02g0182500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3).
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Os02g0182500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.55 | 0.238 | 12.2 | 0.363 | 0.728 | -0.42 | 0.0964 | -2.25 | 0.277 | 17.9 | 7.381 | 536 | -- | -- |
| 26.99 | 0.242 | 12.1 | 0.725 | 0.807 | -0.479 | -0.221 | -- | 0.379 | 17.7 | 23.06 | 376 | -- | -- |
| 25.57 | 0.236 | 12.2 | 0.371 | 0.726 | -0.415 | -- | -2.19 | 0.278 | 17.9 | 6.495 | 538 | -- | -- |
| 27.1 | 0.242 | 12.1 | 0.738 | 0.823 | -0.496 | -- | -- | 0.381 | 17.7 | 23.21 | 365 | -- | -- |
| 44.48 | 0.311 | 12.2 | 0.305 | -- | -0.468 | -- | -2.13 | 0.248 | -- | 12.2 | 7038 | -- | -- |
| 31.07 | 0.261 | 12.1 | 0.633 | 0.604 | -- | -0.456 | -- | 0.311 | 17.8 | -- | -- | -- | -- |
| 31.55 | 0.263 | 12.1 | 0.637 | 0.602 | -- | -- | -- | 0.309 | 17.7 | -- | -- | -- | -- |
| 45.29 | 0.313 | 12.1 | 0.726 | -- | -0.39 | -- | -- | 0.271 | -- | 27.71 | 4200 | -- | -- |
| 39.74 | 0.294 | 12.1 | -- | 0.721 | -0.44 | -- | -- | 0.22 | 17.5 | 28.5 | 213 | -- | -- |
| 50.34 | 0.332 | 12.1 | 0.618 | -- | -- | -- | -- | 0.295 | -- | -- | -- | -- | -- |
| 42.23 | 0.304 | 12.1 | -- | 0.592 | -- | -- | -- | 0.238 | 17.7 | -- | -- | -- | -- |
| 58.04 | 0.355 | 12.1 | -- | -- | -0.255 | -- | -- | 0.176 | -- | 30.2 | 4067 | -- | -- |
| 60.4 | 0.363 | 12.1 | -- | -- | -- | -- | -- | 0.227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.07 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 6 |
| 15 | 25.10 | wind | 1 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 17 | 25.16 | temperature | 30 | 720 | > th | dose independent | sin | 7 | NA |
| 22 | 25.30 | temperature | 30 | 270 | < th | dose independent | sin | 2 | NA |
| 25 | 25.31 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 30 | 25.34 | wind | 1 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 50 | 25.41 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 17 |
| 51 | 25.41 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 54 | 25.42 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 78 | 25.46 | temperature | 15 | 720 | > th | dose dependent | sin | 23 | NA |
| 90 | 25.48 | temperature | 25 | 720 | > th | dose dependent | sin | 7 | NA |
| 94 | 25.49 | wind | 1 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 103 | 25.52 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 114 | 25.54 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 8 |
| 115 | 25.54 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 124 | 25.55 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 152 | 25.58 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 154 | 25.59 | temperature | 30 | 4320 | < th | dose independent | sin | 6 | NA |
| 210 | 25.62 | temperature | 30 | 4320 | > th | dose independent | sin | 7 | NA |
| 235 | 25.63 | temperature | 30 | 270 | < th | dose independent | rect. | 20 | 23 |
| 307 | 25.65 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 328 | 25.67 | temperature | 30 | 720 | < th | dose independent | rect. | 6 | 11 |
| 330 | 25.67 | temperature | 25 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 353 | 25.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 364 | 25.69 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 501 | 25.76 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 505 | 25.76 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 515 | 25.77 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 552 | 25.78 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 598 | 25.79 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 682 | 25.81 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 684 | 25.81 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 703 | 25.82 | temperature | 30 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 772 | 25.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 773 | 25.83 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 786 | 25.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 814 | 25.84 | temperature | 30 | 4320 | < th | dose independent | rect. | 9 | 21 |
| 817 | 25.84 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 23 |
| 819 | 25.84 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 830 | 25.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 831 | 25.85 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |
| 938 | 25.85 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 939 | 25.85 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 3 |