Os02g0181800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin fusion degradation 1-like.
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Os02g0181800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin fusion degradation 1-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.52 | 0.213 | 12.2 | -0.15 | 0.499 | -0.923 | 0.406 | -0.568 | 0.0434 | 4.85 | 20.7 | 1202 | -- | -- |
| 20.98 | 0.213 | 12.2 | -0.0887 | 0.495 | -0.795 | 0.424 | -- | 0.0702 | 4.79 | 21.2 | 1123 | -- | -- |
| 20.89 | 0.213 | 12.2 | -0.158 | 0.498 | -0.894 | -- | -0.516 | 0.0447 | 4.96 | 20.9 | 1205 | -- | -- |
| 21.36 | 0.215 | 12.2 | -0.071 | 0.5 | -0.799 | -- | -- | 0.0767 | 4.82 | 21.23 | 1128 | -- | -- |
| 31.99 | 0.263 | 12.2 | -0.144 | -- | -0.788 | -- | -0.254 | 0.0602 | -- | 20.96 | 586 | -- | -- |
| 40.03 | 0.297 | 12.2 | -0.393 | 0.469 | -- | 0.481 | -- | -0.14 | 5.37 | -- | -- | -- | -- |
| 40.59 | 0.298 | 12.2 | -0.391 | 0.473 | -- | -- | -- | -0.142 | 5.49 | -- | -- | -- | -- |
| 32.2 | 0.264 | 12.2 | -0.105 | -- | -0.755 | -- | -- | 0.0564 | -- | 20.97 | 582 | -- | -- |
| 21.43 | 0.216 | 12.2 | -- | 0.498 | -0.842 | -- | -- | 0.0754 | 4.87 | 20.9 | 1147 | -- | -- |
| 52.22 | 0.338 | 12.2 | -0.376 | -- | -- | -- | -- | -0.13 | -- | -- | -- | -- | -- |
| 44.63 | 0.312 | 12.2 | -- | 0.466 | -- | -- | -- | -0.098 | 5.52 | -- | -- | -- | -- |
| 32.46 | 0.265 | 12.2 | -- | -- | -0.78 | -- | -- | 0.0731 | -- | 20.98 | 585 | -- | -- |
| 55.95 | 0.349 | 12.2 | -- | -- | -- | -- | -- | -0.0884 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.91 | temperature | 15 | 270 | > th | dose dependent | sin | 4 | NA |
| 5 | 19.99 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 7 | 20.12 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 11 | 20.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 19 | 20.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 17 |
| 22 | 20.43 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 40 | 20.66 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 52 | 20.78 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 69 | 20.90 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 76 | 20.98 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 85 | 21.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 86 | 21.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 116 | 21.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 125 | 21.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 191 | 21.39 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 261 | 21.54 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 268 | 21.57 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 346 | 21.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 401 | 21.82 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 438 | 21.90 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 475 | 21.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 537 | 22.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 13 |
| 665 | 22.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 670 | 22.19 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 770 | 22.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 786 | 22.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 825 | 22.35 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 877 | 22.41 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 889 | 22.42 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |