Os02g0179800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0179800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.9 | 0.21 | 12 | 0.911 | 0.619 | 0.0525 | -0.267 | 1.19 | 0.161 | 21.7 | 19.2 | 2005 | -- | -- |
| 21.19 | 0.214 | 12.1 | 0.839 | 0.612 | -0.288 | -0.35 | -- | 0.12 | 21.4 | 17.05 | 4733 | -- | -- |
| 20.03 | 0.208 | 12 | 0.894 | 0.617 | 0.0456 | -- | 1.23 | 0.156 | 21.8 | 19.2 | 1659 | -- | -- |
| 20.32 | 0.21 | 12.1 | 0.892 | 0.61 | -0.469 | -- | -- | 0.148 | 21.7 | 13.46 | 9930 | -- | -- |
| 42.51 | 0.304 | 12 | 0.937 | -- | 0.0921 | -- | 1.53 | 0.161 | -- | 18.9 | 1709 | -- | -- |
| 22.65 | 0.223 | 12.1 | 0.684 | 0.623 | -- | -0.197 | -- | 0.0953 | 21.7 | -- | -- | -- | -- |
| 22.8 | 0.224 | 12.1 | 0.691 | 0.623 | -- | -- | -- | 0.0956 | 21.7 | -- | -- | -- | -- |
| 43.31 | 0.307 | 12.1 | 0.922 | -- | -0.449 | -- | -- | 0.154 | -- | 13.3 | 10077 | -- | -- |
| 28.34 | 0.248 | 12.1 | -- | 0.576 | 0.477 | -- | -- | -0.0651 | 22.2 | 18.3 | 47520 | -- | -- |
| 45.93 | 0.317 | 12.1 | 0.697 | -- | -- | -- | -- | 0.0949 | -- | -- | -- | -- | -- |
| 35.38 | 0.278 | 12.1 | -- | 0.625 | -- | -- | -- | 0.0186 | 21.8 | -- | -- | -- | -- |
| 50.34 | 0.33 | 12.1 | -- | -- | 0.431 | -- | -- | -0.124 | -- | 21.05 | 47520 | -- | -- |
| 58.74 | 0.358 | 12.1 | -- | -- | -- | -- | -- | 0.0176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.75 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 2 | 18.84 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 3 | 18.91 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 6 | 18.92 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 8 | 18.95 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 29 | 19.10 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 68 | 19.24 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 94 | 19.35 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 121 | 19.43 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 128 | 19.44 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 131 | 19.45 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 138 | 19.47 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 143 | 19.48 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 146 | 19.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 150 | 19.49 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 151 | 19.49 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 163 | 19.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 178 | 19.53 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 194 | 19.56 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 200 | 19.57 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 207 | 19.58 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 209 | 19.58 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 210 | 19.58 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 212 | 19.58 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 218 | 19.58 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 238 | 19.60 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 259 | 19.62 | humidity | 60.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 269 | 19.62 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 13 | 18 |
| 273 | 19.63 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 299 | 19.64 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 13 | 15 |
| 311 | 19.65 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 331 | 19.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 338 | 19.66 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 21 |
| 348 | 19.67 | humidity | 60.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 358 | 19.67 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 21 |
| 370 | 19.68 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 383 | 19.68 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 416 | 19.69 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 447 | 19.70 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 468 | 19.71 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 21 | 9 |
| 481 | 19.71 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 19 | 15 |
| 505 | 19.72 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 516 | 19.73 | temperature | 20.0 | 4320 | > th | dose independent | sin | 20 | NA |
| 518 | 19.73 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 536 | 19.74 | humidity | 60.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 564 | 19.75 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 634 | 19.78 | temperature | 20.0 | 4320 | < th | dose independent | sin | 20 | NA |
| 635 | 19.78 | humidity | 60.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 637 | 19.78 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 679 | 19.79 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 19 |
| 731 | 19.81 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 737 | 19.81 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 752 | 19.82 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 754 | 19.82 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 763 | 19.82 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 801 | 19.83 | temperature | 20.0 | 4320 | < th | dose dependent | sin | 19 | NA |
| 850 | 19.84 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 5 | 13 |
| 887 | 19.85 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 894 | 19.85 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 900 | 19.85 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 905 | 19.85 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 911 | 19.85 | humidity | 60.0 | 43200 | < th | dose dependent | no | NA | NA |
| 919 | 19.85 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 7 | 11 |
| 932 | 19.85 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 18 |
| 998 | 19.86 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 999 | 19.86 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 22 | 12 |