Os02g0160200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0160200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.83 | 0.325 | 10.7 | -0.14 | 0.484 | -0.493 | -0.234 | -0.417 | -0.298 | 8.14 | 1014 | 9102 | -- | -- |
| 47.6 | 0.321 | 10.7 | 0.0414 | 0.462 | -0.474 | -0.227 | -- | -0.246 | 7.89 | 1013 | 19809 | -- | -- |
| 46.92 | 0.319 | 10.7 | -0.0746 | 0.48 | -0.452 | -- | -0.37 | -0.271 | 8.11 | 1013 | 19803 | -- | -- |
| 47.66 | 0.322 | 10.7 | 0.0682 | 0.482 | -0.477 | -- | -- | -0.228 | 8.21 | 1013 | 19858 | -- | -- |
| 59.63 | 0.36 | 10.7 | -0.118 | -- | -0.464 | -- | -0.429 | -0.268 | -- | 1013 | 19803 | -- | -- |
| 60.28 | 0.364 | 10.7 | -0.175 | 0.484 | -- | -0.203 | -- | -0.389 | 8.23 | -- | -- | -- | -- |
| 60.4 | 0.364 | 10.7 | -0.181 | 0.483 | -- | -- | -- | -0.389 | 8.32 | -- | -- | -- | -- |
| 60.45 | 0.362 | 10.7 | 0.086 | -- | -0.487 | -- | -- | -0.221 | -- | 1013 | 19803 | -- | -- |
| 47.76 | 0.322 | 10.7 | -- | 0.483 | -0.475 | -- | -- | -0.232 | 8.19 | 1013 | 19807 | -- | -- |
| 73.36 | 0.4 | 10.7 | -0.178 | -- | -- | -- | -- | -0.384 | -- | -- | -- | -- | -- |
| 61.26 | 0.366 | 10.7 | -- | 0.482 | -- | -- | -- | -0.369 | 8.35 | -- | -- | -- | -- |
| 60.53 | 0.362 | 10.7 | -- | -- | -0.468 | -- | -- | -0.224 | -- | 1013 | 19803 | -- | -- |
| 74.19 | 0.402 | 10.7 | -- | -- | -- | -- | -- | -0.364 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.09 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 2 | 44.79 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 4 | 45.11 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 7 |
| 5 | 45.16 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 8 | 45.27 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 10 |
| 11 | 45.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 12 | 45.31 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 27 | 45.40 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 14 |
| 56 | 45.57 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 65 | 45.60 | wind | 1.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 89 | 45.68 | wind | 1.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 92 | 45.70 | wind | 1.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 112 | 45.77 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 115 | 45.78 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 116 | 45.78 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 126 | 45.81 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 191 | 46.04 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 11 |
| 195 | 46.05 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 11 |
| 321 | 46.47 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 322 | 46.48 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 324 | 46.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 344 | 46.57 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 346 | 46.57 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 15 |
| 358 | 46.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 365 | 46.63 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 375 | 46.69 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 392 | 46.71 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 21 |
| 406 | 46.77 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 410 | 46.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 412 | 46.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 436 | 46.83 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 437 | 46.83 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 506 | 46.92 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 507 | 46.92 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 517 | 46.94 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 529 | 46.96 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 546 | 47.01 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 554 | 47.03 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 607 | 47.10 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 5 | 9 |
| 635 | 47.14 | humidity | 50.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 647 | 47.15 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 19 |
| 726 | 47.21 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 22 |
| 751 | 47.24 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 793 | 47.27 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 22 |
| 807 | 47.29 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 814 | 47.29 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 834 | 47.31 | humidity | 50.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 841 | 47.31 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 867 | 47.35 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 929 | 47.40 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 984 | 47.44 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 985 | 47.45 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 987 | 47.45 | wind | 1.0 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 988 | 47.45 | wind | 1.0 | 14400 | > th | dose independent | rect. | 12 | 22 |