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Os02g0156300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Serine/threonine-protein kinase BRI1-like 2 precursor (EC 2.7.1.37) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.02 (0.0201) R2 : 9.1e-07
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.000863 (0.0423) R2dN8 : 1.18e-06 R2N8 : 9.1e-07
σ : 0.379
deviance : 65.84
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.23 0.343 6.98 -0.192 0.136 0.592 -0.0223 -0.67 0.0912 9.86 24.8 11 -- --
53.95 0.345 7 -0.296 0.143 0.638 0.163 -- 0.0681 9.64 24.7 16 -- --
53.23 0.34 6.98 -0.194 0.136 0.591 -- -0.66 0.0906 9.77 24.8 11 -- --
53.98 0.342 7 -0.292 0.14 0.641 -- -- 0.0673 9.93 24.71 15 -- --
54.15 0.343 6.99 -0.202 -- 0.548 -- -0.668 0.0914 -- 25 62 -- --
59.99 0.363 7.02 -0.442 0.11 -- 0.275 -- -0.0489 6.46 -- -- -- --
60.18 0.363 7.02 -0.439 0.112 -- -- -- -0.05 6.18 -- -- -- --
54.92 0.345 7 -0.295 -- 0.606 -- -- 0.0666 -- 24.96 76 -- --
55.93 0.348 6.99 -- 0.165 0.778 -- -- 0.127 10.6 24.9 58 -- --
60.83 0.364 7.03 -0.436 -- -- -- -- -0.0475 -- -- -- -- --
65.26 0.378 7.01 -- 0.106 -- -- -- -0.00108 6.4 -- -- -- --
57.05 0.352 6.99 -- -- 0.705 -- -- 0.114 -- 24.9 86 -- --
65.84 0.379 7.02 -- -- -- -- -- 0.000863 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.66 temperature 15.0 30 > th dose dependent rect. 15 23
6 52.24 temperature 15.0 10 > th dose dependent rect. 24 22
7 52.26 temperature 30.0 30 < th dose dependent rect. 3 23
15 52.65 temperature 15.0 30 > th dose dependent rect. 6 23
18 52.71 temperature 20.0 270 > th dose independent rect. 22 22
24 52.91 temperature 25.0 90 < th dose dependent rect. 23 22
27 52.95 temperature 25.0 90 < th dose dependent rect. 23 20
32 53.05 atmosphere 1000.0 14400 > th dose independent rect. 14 1
33 53.05 atmosphere 1000.0 14400 < th dose independent rect. 14 1
34 53.05 temperature 15.0 10 > th dose dependent rect. 2 20
35 53.08 temperature 25.0 10 < th dose dependent rect. 1 23
49 53.20 temperature 20.0 30 > th dose independent rect. 15 23
50 53.21 temperature 25.0 10 < th dose dependent rect. 23 23
52 53.22 temperature 25.0 10 < th dose dependent rect. 17 23
53 53.22 temperature 25.0 10 < th dose dependent rect. 21 23
56 53.24 temperature 20.0 10 > th dose independent rect. 24 22
57 53.24 temperature 25.0 10 < th dose dependent no NA NA
58 53.24 temperature 25.0 10 < th dose dependent rect. 9 23
59 53.25 atmosphere 1000.0 14400 < th dose independent rect. 4 1
66 53.27 atmosphere 1000.0 14400 > th dose independent rect. 4 1
68 53.27 atmosphere 1000.0 14400 < th dose dependent rect. 16 1
69 53.27 temperature 25.0 10 < th dose dependent rect. 11 23
70 53.27 temperature 25.0 10 < th dose dependent rect. 15 23
72 53.27 temperature 25.0 10 < th dose dependent rect. 19 23
75 53.28 temperature 20.0 720 > th dose independent rect. 6 21
88 53.30 wind 9.0 14400 < th dose independent rect. 20 1
94 53.30 temperature 25.0 10 < th dose dependent rect. 7 23
100 53.31 temperature 25.0 90 < th dose dependent rect. 23 16
101 53.31 temperature 25.0 30 < th dose dependent rect. 13 23
103 53.32 temperature 15.0 30 > th dose dependent rect. 11 23
113 53.34 precipitation 0.1 4320 > th dose dependent rect. 15 4
122 53.35 temperature 25.0 10 < th dose dependent sin 5 NA
141 53.39 wind 9.0 14400 > th dose independent rect. 20 1
146 53.40 precipitation 0.1 4320 < th dose independent rect. 17 2
149 53.40 temperature 15.0 30 > th dose dependent no NA NA
150 53.40 precipitation 0.1 4320 < th dose dependent rect. 17 2
161 53.41 atmosphere 1000.0 14400 > th dose independent rect. 4 14
162 53.41 atmosphere 1000.0 14400 < th dose independent rect. 4 14
165 53.41 atmosphere 1000.0 14400 > th dose independent rect. 21 19
166 53.41 atmosphere 1000.0 14400 < th dose independent rect. 14 20
167 53.41 atmosphere 1000.0 14400 < th dose independent rect. 21 20
168 53.41 atmosphere 1000.0 14400 > th dose independent rect. 21 21
172 53.41 precipitation 0.1 4320 > th dose dependent rect. 6 12
177 53.42 atmosphere 1000.0 14400 > th dose independent rect. 3 6
178 53.42 atmosphere 1000.0 14400 < th dose independent rect. 3 6
182 53.42 atmosphere 1000.0 14400 > th dose independent rect. 21 13
184 53.42 atmosphere 1000.0 14400 < th dose independent rect. 21 13
199 53.42 atmosphere 1000.0 14400 < th dose independent rect. 4 20
249 53.43 atmosphere 1000.0 14400 > th dose independent rect. 4 20
250 53.43 atmosphere 1000.0 14400 > th dose independent rect. 14 20
270 53.43 atmosphere 1000.0 14400 < th dose dependent rect. 3 1
285 53.44 atmosphere 1000.0 14400 > th dose independent rect. 8 10
286 53.44 atmosphere 1000.0 14400 < th dose independent rect. 8 10
313 53.44 atmosphere 1000.0 14400 < th dose independent rect. 14 17
361 53.45 atmosphere 1000.0 14400 < th dose independent no NA NA
363 53.45 atmosphere 1000.0 14400 > th dose independent rect. 8 1
364 53.45 atmosphere 1000.0 14400 > th dose independent rect. 21 1
366 53.45 atmosphere 1000.0 14400 < th dose independent rect. 8 1
368 53.45 atmosphere 1000.0 14400 < th dose independent rect. 21 1
410 53.45 atmosphere 1000.0 14400 < th dose independent rect. 7 17
436 53.45 temperature 20.0 270 < th dose independent rect. 5 22
449 53.45 atmosphere 1000.0 14400 < th dose independent rect. 7 23
453 53.45 atmosphere 1000.0 14400 < th dose independent rect. 17 23
456 53.45 atmosphere 1000.0 14400 < th dose dependent rect. 1 3
457 53.45 atmosphere 1000.0 14400 < th dose dependent rect. 23 5
467 53.46 atmosphere 1000.0 14400 > th dose independent sin 7 NA
468 53.46 atmosphere 1000.0 14400 > th dose independent sin 23 NA
476 53.46 atmosphere 1000.0 14400 > th dose independent no NA NA
477 53.46 atmosphere 1000.0 14400 < th dose independent sin 7 NA
479 53.46 atmosphere 1000.0 14400 < th dose independent sin 22 NA
490 53.46 precipitation 0.1 4320 > th dose independent rect. 17 2
500 53.46 atmosphere 1000.0 14400 > th dose independent rect. 8 8
512 53.46 atmosphere 1000.0 14400 < th dose independent rect. 14 10
534 53.46 atmosphere 1000.0 14400 > th dose independent rect. 7 17
565 53.46 atmosphere 1000.0 14400 > th dose independent rect. 8 22
590 53.46 atmosphere 1000.0 14400 < th dose dependent sin 19 NA
601 53.46 precipitation 0.1 4320 > th dose dependent rect. 9 9
638 53.47 atmosphere 1000.0 14400 > th dose independent rect. 13 11
642 53.47 temperature 20.0 720 > th dose independent rect. 15 12
721 53.47 atmosphere 1000.0 14400 < th dose dependent rect. 1 1
722 53.47 atmosphere 1000.0 14400 < th dose dependent rect. 23 1
750 53.47 atmosphere 1000.0 14400 < th dose dependent rect. 14 14
764 53.47 atmosphere 1000.0 14400 < th dose dependent rect. 23 19
919 53.48 atmosphere 1000.0 14400 < th dose dependent rect. 14 21
939 53.49 atmosphere 1000.0 14400 < th dose independent sin 18 NA