Os02g0155300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0155300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.75 | 0.609 | 4.28 | -2.19 | 0.645 | -3.31 | 0.625 | -3.54 | 0.423 | 0.78 | 19.51 | 4686 | -- | -- |
| 171.94 | 0.611 | 4.37 | -2.26 | 0.638 | -2.01 | 0.494 | -- | 0.392 | 1.44 | 19.8 | 4756 | -- | -- |
| 168.94 | 0.605 | 4.28 | -2.22 | 0.626 | -3.47 | -- | -3.86 | 0.426 | 0.631 | 19.21 | 4750 | -- | -- |
| 172.76 | 0.612 | 4.36 | -2.24 | 0.645 | -1.88 | -- | -- | 0.408 | 0.709 | 19.9 | 4710 | -- | -- |
| 193.58 | 0.648 | 4.21 | -2.23 | -- | -4.7 | -- | -6.44 | 0.459 | -- | 18.9 | 4974 | -- | -- |
| 203.9 | 0.669 | 4.3 | -1.38 | 0.661 | -- | 0.627 | -- | 0.7 | 0.817 | -- | -- | -- | -- |
| 205.56 | 0.671 | 4.3 | -1.4 | 0.659 | -- | -- | -- | 0.697 | 0.75 | -- | -- | -- | -- |
| 198.45 | 0.656 | 4.36 | -2.25 | -- | -1.95 | -- | -- | 0.408 | -- | 19.94 | 4884 | -- | -- |
| 256.13 | 0.745 | 4.26 | -- | 0.626 | -0.837 | -- | -- | 0.809 | 0.869 | 17.7 | 1758 | -- | -- |
| 232.74 | 0.713 | 4.29 | -1.38 | -- | -- | -- | -- | 0.709 | -- | -- | -- | -- | -- |
| 257.46 | 0.751 | 4.26 | -- | 0.638 | -- | -- | -- | 0.853 | 0.649 | -- | -- | -- | -- |
| 280.85 | 0.781 | 4.26 | -- | -- | -0.58 | -- | -- | 0.835 | -- | 18.3 | 1977 | -- | -- |
| 282.95 | 0.785 | 4.25 | -- | -- | -- | -- | -- | 0.862 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.47 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 3 | 154.19 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 17 | 157.75 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 20 | 158.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 7 |
| 36 | 159.58 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 37 | 159.58 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 42 | 159.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 61 | 160.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 70 | 160.97 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 84 | 161.26 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 91 | 161.55 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 98 | 161.68 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 101 | 161.77 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 107 | 161.82 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 114 | 162.00 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 127 | 162.23 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 131 | 162.26 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 137 | 162.27 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 147 | 162.29 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 150 | 162.31 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 159 | 162.39 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 20 |
| 171 | 162.49 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 180 | 162.58 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 215 | 162.78 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 221 | 162.82 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 256 | 163.06 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 279 | 163.10 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 293 | 163.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 295 | 163.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 298 | 163.15 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 299 | 163.15 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 303 | 163.16 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 307 | 163.17 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 311 | 163.18 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 317 | 163.22 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 330 | 163.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 333 | 163.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 335 | 163.32 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 364 | 163.41 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 409 | 163.53 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 429 | 163.57 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 432 | 163.57 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 451 | 163.60 | humidity | 50.0 | 43200 | < th | dose dependent | no | NA | NA |
| 490 | 163.62 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 495 | 163.63 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 11 | 8 |
| 502 | 163.65 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 504 | 163.65 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 8 |
| 534 | 163.69 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 555 | 163.72 | humidity | 50.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 559 | 163.73 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 571 | 163.75 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 578 | 163.76 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 579 | 163.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 629 | 163.89 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 653 | 163.93 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 23 | 10 |
| 658 | 163.95 | humidity | 50.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 669 | 163.95 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 717 | 164.03 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 754 | 164.11 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 765 | 164.14 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 12 | 21 |
| 773 | 164.17 | humidity | 70.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 796 | 164.25 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 799 | 164.25 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 805 | 164.27 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 835 | 164.31 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 11 |
| 845 | 164.31 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 879 | 164.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 880 | 164.41 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 881 | 164.41 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 891 | 164.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 978 | 164.59 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 986 | 164.60 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 24 | 12 |