Os02g0152600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0152600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.4 | 0.327 | 10.2 | 0.227 | 0.933 | -0.681 | 0.292 | -0.199 | 0.248 | 22.1 | 70 | 1205 | -- | -- |
| 48.22 | 0.323 | 10.2 | 0.248 | 0.977 | -0.71 | 0.257 | -- | 0.206 | 22.1 | 68.85 | 1143 | -- | -- |
| 48.53 | 0.324 | 10.2 | 0.24 | 0.954 | -0.689 | -- | 0.0149 | 0.215 | 22.1 | 68 | 1169 | -- | -- |
| 48.38 | 0.324 | 10.2 | 0.228 | 0.971 | -0.708 | -- | -- | 0.175 | 22 | 67.61 | 1146 | -- | -- |
| 89.06 | 0.44 | 10.1 | 0.216 | -- | -0.607 | -- | -0.0602 | 0.303 | -- | 70 | 1489 | -- | -- |
| 65.36 | 0.379 | 10.2 | 0.097 | 0.803 | -- | 0.0768 | -- | 0.204 | 21.6 | -- | -- | -- | -- |
| 65.38 | 0.379 | 10.2 | 0.0942 | 0.803 | -- | -- | -- | 0.204 | 21.6 | -- | -- | -- | -- |
| 89.06 | 0.44 | 10.1 | 0.206 | -- | -0.63 | -- | -- | 0.29 | -- | 70.65 | 1496 | -- | -- |
| 49.71 | 0.328 | 10.2 | -- | 0.955 | -0.67 | -- | -- | 0.151 | 22.1 | 67.76 | 1161 | -- | -- |
| 103.47 | 0.475 | 10.2 | 0.1 | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
| 65.61 | 0.379 | 10.2 | -- | 0.803 | -- | -- | -- | 0.194 | 21.6 | -- | -- | -- | -- |
| 90.34 | 0.443 | 10.1 | -- | -- | -0.609 | -- | -- | 0.263 | -- | 71 | 1496 | -- | -- |
| 103.73 | 0.475 | 10.2 | -- | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.69 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 16 | 49.71 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 18 | 49.80 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 33 | 49.97 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 34 | 49.98 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 40 | 50.05 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 48 | 50.11 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 49 | 50.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 9 |
| 54 | 50.14 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 66 | 50.17 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 9 |
| 83 | 50.26 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 112 | 50.34 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 234 | 50.63 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 256 | 50.69 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 285 | 50.76 | wind | 3.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 313 | 50.82 | wind | 9.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 336 | 50.86 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 344 | 50.86 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 351 | 50.88 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 478 | 51.18 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 524 | 51.27 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 536 | 51.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 558 | 51.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 575 | 51.34 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 614 | 51.41 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 645 | 51.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 648 | 51.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 8 |
| 687 | 51.47 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 698 | 51.49 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 715 | 51.51 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 716 | 51.52 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 726 | 51.54 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 736 | 51.54 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 18 |
| 739 | 51.55 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 740 | 51.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 743 | 51.55 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 777 | 51.58 | wind | 7.0 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 798 | 51.61 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 814 | 51.64 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 829 | 51.64 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 894 | 51.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 895 | 51.65 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 933 | 51.67 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 936 | 51.67 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 939 | 51.68 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 951 | 51.68 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 956 | 51.69 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 992 | 51.73 | wind | 7.0 | 43200 | < th | dose independent | rect. | 4 | 10 |