Os02g0150000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0150000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 226.73 | 0.707 | 3.54 | 0.331 | 0.107 | 2.1 | -0.528 | 3.41 | 0.161 | 3.85 | 19.94 | 685 | -- | -- |
| 231.34 | 0.708 | 3.48 | 0.49 | 0.0559 | 0.902 | -0.747 | -- | 0.257 | 1.01 | 24.1 | 807 | -- | -- |
| 227.49 | 0.702 | 3.54 | 0.332 | 0.108 | 2.2 | -- | 3.68 | 0.161 | 4.32 | 19.74 | 683 | -- | -- |
| 233.36 | 0.711 | 3.48 | 0.49 | 0.114 | 0.855 | -- | -- | 0.258 | 5.04 | 24.4 | 907 | -- | -- |
| 228.07 | 0.703 | 3.54 | 0.336 | -- | 2.26 | -- | 3.78 | 0.162 | -- | 19.71 | 625 | -- | -- |
| 242.86 | 0.731 | 3.52 | 0.231 | 0.0559 | -- | 0.684 | -- | 0.0931 | 12.5 | -- | -- | -- | -- |
| 243.96 | 0.731 | 3.51 | 0.253 | 0.141 | -- | -- | -- | 0.0938 | 7.95 | -- | -- | -- | -- |
| 233.87 | 0.712 | 3.48 | 0.496 | -- | 0.853 | -- | -- | 0.263 | -- | 24.28 | 784 | -- | -- |
| 239.08 | 0.72 | 3.5 | -- | 0.105 | 0.667 | -- | -- | 0.18 | 4.63 | 24.43 | 807 | -- | -- |
| 245.04 | 0.731 | 3.52 | 0.255 | -- | -- | -- | -- | 0.0956 | -- | -- | -- | -- | -- |
| 245.66 | 0.733 | 3.52 | -- | 0.143 | -- | -- | -- | 0.0655 | 7.83 | -- | -- | -- | -- |
| 239.56 | 0.721 | 3.5 | -- | -- | 0.641 | -- | -- | 0.173 | -- | 24.31 | 761 | -- | -- |
| 246.76 | 0.733 | 3.52 | -- | -- | -- | -- | -- | 0.0673 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 224.54 | wind | 1 | 270 | < th | dose independent | rect. | 8 | 1 |
| 2 | 224.79 | wind | 1 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 6 | 225.31 | temperature | 20 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 16 | 225.68 | temperature | 20 | 720 | < th | dose dependent | sin | 0 | NA |
| 27 | 225.94 | temperature | 20 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 48 | 226.26 | temperature | 20 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 49 | 226.26 | temperature | 20 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 64 | 226.45 | temperature | 20 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 85 | 226.60 | temperature | 20 | 720 | < th | dose dependent | rect. | 12 | 20 |
| 125 | 226.78 | temperature | 20 | 720 | < th | dose dependent | no | NA | NA |
| 140 | 226.83 | temperature | 20 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 209 | 227.07 | temperature | 20 | 720 | < th | dose dependent | rect. | 22 | 10 |
| 323 | 227.81 | temperature | 20 | 720 | < th | dose independent | sin | 3 | NA |
| 332 | 227.86 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 15 |
| 340 | 227.95 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 17 |
| 343 | 227.96 | temperature | 20 | 720 | > th | dose independent | sin | 2 | NA |
| 349 | 227.98 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 10 |
| 350 | 227.98 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 16 |
| 355 | 228.00 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 12 |
| 361 | 228.02 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 4 |
| 384 | 228.10 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 9 |
| 411 | 228.20 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 19 |
| 438 | 228.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 489 | 228.47 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 9 |
| 621 | 229.11 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 680 | 229.31 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 741 | 229.54 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 773 | 229.64 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 6 |
| 779 | 229.66 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 789 | 229.71 | temperature | 20 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 810 | 229.79 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 812 | 229.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 24 | 6 |
| 859 | 229.92 | temperature | 15 | 720 | > th | dose dependent | rect. | 24 | 9 |
| 883 | 229.98 | temperature | 20 | 43200 | < th | dose dependent | rect. | 8 | 4 |