Os02g0149600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os02g0149600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.87 | 0.335 | 3.03 | 0.18 | 0.0652 | 0.138 | -0.0309 | 0.837 | 0.0893 | 6.61 | 81 | 5928 | -- | -- |
| 51.65 | 0.335 | 3.03 | 0.106 | 0.0662 | 0.202 | -0.0584 | -- | 0.0456 | 6.45 | 81.03 | 7333 | -- | -- |
| 50.87 | 0.332 | 3.03 | 0.18 | 0.0653 | 0.138 | -- | 0.839 | 0.0893 | 6.74 | 81 | 5929 | -- | -- |
| 51.65 | 0.335 | 3.03 | 0.0919 | 0.0668 | 0.186 | -- | -- | 0.044 | 6.51 | 82.66 | 7324 | -- | -- |
| 51.09 | 0.333 | 3.03 | 0.184 | -- | 0.121 | -- | 0.866 | 0.1 | -- | 80.8 | 5912 | -- | -- |
| 52.26 | 0.339 | 3.01 | 0.064 | 0.0637 | -- | -0.0513 | -- | 0.119 | 6.53 | -- | -- | -- | -- |
| 52.27 | 0.339 | 3.01 | 0.0634 | 0.0635 | -- | -- | -- | 0.119 | 6.84 | -- | -- | -- | -- |
| 51.88 | 0.335 | 3.03 | 0.0931 | -- | 0.184 | -- | -- | 0.0458 | -- | 82.77 | 7284 | -- | -- |
| 51.87 | 0.335 | 3.03 | -- | 0.0666 | 0.165 | -- | -- | 0.0426 | 6.55 | 82.52 | 7324 | -- | -- |
| 52.48 | 0.339 | 3.01 | 0.0648 | -- | -- | -- | -- | 0.12 | -- | -- | -- | -- | -- |
| 52.37 | 0.339 | 3.01 | -- | 0.0643 | -- | -- | -- | 0.112 | 6.78 | -- | -- | -- | -- |
| 52.1 | 0.336 | 3.03 | -- | -- | 0.162 | -- | -- | 0.0443 | -- | 82.66 | 7290 | -- | -- |
| 52.59 | 0.338 | 3.01 | -- | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.44 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 4 | 48.46 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 10 | 48.48 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 14 | 48.49 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 15 | 48.50 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 18 | 48.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 21 | 48.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 25 | 48.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 31 | 48.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 32 | 48.52 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 52 | 48.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 55 | 48.53 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 56 | 48.53 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 57 | 48.53 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 62 | 48.55 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 63 | 48.55 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 66 | 48.56 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 69 | 48.56 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 72 | 48.56 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 73 | 48.56 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 77 | 48.56 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 78 | 48.56 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 80 | 48.56 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 85 | 48.56 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 86 | 48.56 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 88 | 48.56 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 93 | 48.56 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 94 | 48.57 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 97 | 48.57 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 100 | 48.58 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 101 | 48.58 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 114 | 48.68 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 115 | 48.68 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 164 | 49.10 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 174 | 49.45 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 21 | 23 |
| 175 | 49.45 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 195 | 49.88 | humidity | 50.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 235 | 50.18 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 236 | 50.18 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 305 | 50.57 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 314 | 50.60 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 316 | 50.61 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 319 | 50.64 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 324 | 50.66 | humidity | 50.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 326 | 50.67 | temperature | 30.0 | 30 | < th | dose independent | rect. | 16 | 1 |
| 332 | 50.68 | wind | 5.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 336 | 50.70 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 337 | 50.71 | wind | 5.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 340 | 50.75 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 347 | 50.81 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 366 | 50.86 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 374 | 50.88 | temperature | 30.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 375 | 50.88 | wind | 9.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 386 | 50.93 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 388 | 50.93 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 389 | 50.94 | radiation | 10.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 432 | 50.96 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 14 |
| 446 | 50.96 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 14 |
| 451 | 50.97 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 2 |
| 459 | 50.98 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 465 | 50.98 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 468 | 50.99 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 21 |
| 469 | 50.99 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 21 |
| 472 | 50.99 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 482 | 51.00 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 483 | 51.00 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 7 |
| 489 | 51.00 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 493 | 51.00 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 500 | 51.00 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 504 | 51.01 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 609 | 51.02 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 630 | 51.03 | temperature | 30.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 637 | 51.03 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 646 | 51.03 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 648 | 51.03 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 649 | 51.03 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 650 | 51.03 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 658 | 51.03 | humidity | 70.0 | 90 | > th | dose independent | rect. | 21 | 10 |
| 659 | 51.03 | radiation | 20.0 | 90 | < th | dose independent | rect. | 21 | 10 |
| 708 | 51.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 20 | 21 |
| 718 | 51.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 719 | 51.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 726 | 51.03 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 781 | 51.04 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 791 | 51.04 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 798 | 51.04 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 10 | 6 |