Os02g0148300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Myosin-like protein (Fragment).
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Os02g0148300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Myosin-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.54 | 0.255 | 10.1 | 1.17 | 1.19 | -0.796 | -0.15 | 3.54 | 0.376 | 5.3 | 26.3 | 4578 | -- | -- |
| 30.95 | 0.259 | 10.1 | 1.05 | 1.23 | -1.06 | -0.323 | -- | 0.393 | 5.11 | 19.6 | 21414 | -- | -- |
| 29.58 | 0.253 | 10.1 | 1.18 | 1.19 | -0.79 | -- | 3.52 | 0.376 | 5.31 | 26.3 | 4610 | -- | -- |
| 30.62 | 0.258 | 10.2 | 1.1 | 1.19 | -1.09 | -- | -- | 0.383 | 5.28 | 19.09 | 22513 | -- | -- |
| 86.4 | 0.435 | 10.2 | 0.309 | -- | -0.636 | -- | 0.485 | 0.186 | -- | 27.2 | 4873 | -- | -- |
| 45.24 | 0.315 | 10.2 | 0.0282 | 1.2 | -- | -0.157 | -- | 0.0292 | 5.36 | -- | -- | -- | -- |
| 45.3 | 0.315 | 10.2 | 0.028 | 1.2 | -- | -- | -- | 0.0299 | 5.37 | -- | -- | -- | -- |
| 86.95 | 0.436 | 10.2 | 0.216 | -- | -0.616 | -- | -- | 0.159 | -- | 27.2 | 4873 | -- | -- |
| 36.93 | 0.283 | 10.2 | -- | 1.23 | -0.453 | -- | -- | 0.18 | 5.27 | 22.84 | 4093 | -- | -- |
| 120.76 | 0.513 | 10.2 | 0.0689 | -- | -- | -- | -- | 0.0597 | -- | -- | -- | -- | -- |
| 45.32 | 0.315 | 10.2 | -- | 1.2 | -- | -- | -- | 0.0268 | 5.37 | -- | -- | -- | -- |
| 88.16 | 0.439 | 10.2 | -- | -- | -0.601 | -- | -- | 0.133 | -- | 27.2 | 4873 | -- | -- |
| 120.88 | 0.513 | 10.2 | -- | -- | -- | -- | -- | 0.052 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 4 | 29.44 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 8 | 29.54 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 9 |
| 10 | 29.55 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 9 |
| 15 | 29.57 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 16 | 29.57 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 4 |
| 23 | 29.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 25 | 29.60 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 28 | 29.61 | temperature | 20 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 61 | 29.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 7 |
| 70 | 29.75 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 73 | 29.76 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 96 | 29.81 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 150 | 29.91 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 17 |
| 151 | 29.92 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 176 | 29.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 177 | 29.93 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 184 | 29.94 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 186 | 29.94 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 4 |
| 211 | 29.97 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 220 | 29.98 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 232 | 29.99 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 243 | 30.00 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 7 |
| 253 | 30.01 | temperature | 20 | 4320 | > th | dose dependent | sin | 7 | NA |
| 260 | 30.02 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 324 | 30.08 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 325 | 30.08 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 337 | 30.09 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 344 | 30.10 | humidity | 80 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 360 | 30.11 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 378 | 30.12 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 395 | 30.13 | temperature | 15 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 408 | 30.14 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 8 |
| 411 | 30.14 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 412 | 30.14 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 473 | 30.18 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 505 | 30.19 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 508 | 30.20 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 527 | 30.21 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 16 |
| 541 | 30.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 23 |
| 550 | 30.22 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 576 | 30.23 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 624 | 30.25 | temperature | 20 | 4320 | > th | dose independent | sin | 10 | NA |
| 663 | 30.27 | temperature | 20 | 4320 | < th | dose independent | sin | 10 | NA |
| 710 | 30.29 | humidity | 90 | 43200 | < th | dose independent | sin | 19 | NA |
| 756 | 30.30 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 840 | 30.34 | humidity | 90 | 43200 | > th | dose independent | sin | 19 | NA |
| 891 | 30.36 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 892 | 30.36 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 908 | 30.37 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 927 | 30.38 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 940 | 30.38 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 21 |
| 983 | 30.40 | radiation | 1 | 43200 | < th | dose dependent | sin | 11 | NA |
| 984 | 30.40 | temperature | 15 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 991 | 30.41 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 10 | 1 |