FiT-DB / Search/ Help/ Sample detail

Os02g0147700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0121) R2 : 0.193
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.267 (0.0255) R2dN8 : 0.25 R2N8 : 0.193
σ : 0.228
deviance : 23.91
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.55 0.218 10.7 -0.029 0.123 0.169 0.129 -0.38 0.267 4.57 1010 67 -- --
22.04 0.219 10.7 -0.00531 0.125 0.181 0.13 -- 0.273 4.75 1010 66 -- --
21.59 0.216 10.7 -0.0298 0.124 0.172 -- -0.378 0.266 4.67 1010 66 -- --
22.07 0.219 10.7 -0.00402 0.122 0.188 -- -- 0.27 4.68 1010 66 -- --
22.41 0.22 10.7 -0.0236 -- 0.163 -- -0.368 0.269 -- 1010 68 -- --
23.13 0.225 10.7 0.0106 0.115 -- 0.13 -- 0.266 3.97 -- -- -- --
23.17 0.225 10.7 0.00893 0.115 -- -- -- 0.265 3.85 -- -- -- --
22.86 0.223 10.7 0.00119 -- 0.179 -- -- 0.273 -- 1010 69 -- --
22.07 0.219 10.7 -- 0.122 0.187 -- -- 0.271 4.67 1010 66 -- --
23.9 0.228 10.7 0.0137 -- -- -- -- 0.268 -- -- -- -- --
23.17 0.225 10.7 -- 0.115 -- -- -- 0.264 3.85 -- -- -- --
22.87 0.223 10.7 -- -- 0.179 -- -- 0.273 -- 1010 69 -- --
23.91 0.228 10.7 -- -- -- -- -- 0.267 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.21 temperature 25.0 90 > th dose dependent rect. 9 6
3 21.23 atmosphere 1010.0 30 < th dose independent rect. 9 22
9 21.38 temperature 25.0 270 > th dose dependent rect. 10 1
12 21.40 temperature 10.0 270 > th dose dependent rect. 17 22
16 21.42 temperature 15.0 90 > th dose dependent rect. 9 14
17 21.44 precipitation 0.1 1440 < th dose independent rect. 6 12
19 21.44 precipitation 0.1 1440 < th dose dependent rect. 6 12
21 21.45 precipitation 0.1 1440 < th dose independent rect. 13 5
22 21.45 precipitation 0.1 1440 < th dose independent rect. 9 9
23 21.45 precipitation 0.1 1440 > th dose independent rect. 6 12
25 21.45 precipitation 0.1 1440 < th dose dependent rect. 13 5
26 21.45 precipitation 0.1 1440 < th dose dependent rect. 9 9
28 21.47 temperature 25.0 90 > th dose independent rect. 9 6
30 21.47 atmosphere 1005.0 90 > th dose dependent rect. 23 10
35 21.49 precipitation 0.1 1440 > th dose independent rect. 9 9
44 21.50 precipitation 0.1 1440 > th dose dependent rect. 5 14
64 21.52 temperature 20.0 270 > th dose dependent rect. 1 13
73 21.53 temperature 10.0 90 > th dose dependent rect. 9 22
75 21.54 precipitation 0.1 1440 > th dose dependent rect. 16 1
80 21.55 temperature 25.0 270 > th dose independent rect. 9 4
92 21.56 precipitation 0.1 1440 > th dose independent rect. 16 1
96 21.56 atmosphere 1005.0 10 > th dose dependent rect. 24 9
112 21.58 precipitation 0.1 1440 > th dose dependent rect. 9 10
117 21.59 precipitation 0.1 1440 > th dose dependent sin 23 NA
122 21.59 temperature 25.0 90 > th dose dependent rect. 5 10
134 21.60 temperature 30.0 90 < th dose dependent sin 0 NA
145 21.61 precipitation 0.1 1440 > th dose independent rect. 12 6
160 21.61 atmosphere 1000.0 30 > th dose dependent rect. 16 17
169 21.62 temperature 30.0 90 < th dose dependent rect. 7 13
170 21.62 temperature 25.0 90 > th dose dependent rect. 20 19
186 21.63 temperature 30.0 270 < th dose dependent rect. 3 9
196 21.63 atmosphere 995.0 30 > th dose dependent rect. 15 21
205 21.64 temperature 25.0 30 > th dose dependent rect. 9 9
220 21.65 atmosphere 1010.0 90 < th dose independent rect. 20 19
221 21.65 atmosphere 1010.0 90 < th dose independent rect. 19 22
242 21.66 temperature 25.0 90 > th dose dependent sin 1 NA
251 21.67 precipitation 0.1 1440 > th dose independent sin 22 NA
281 21.67 temperature 25.0 270 > th dose dependent rect. 17 21
285 21.68 precipitation 0.1 1440 < th dose independent sin 22 NA
286 21.68 temperature 25.0 270 > th dose independent rect. 10 1
292 21.68 precipitation 0.1 1440 < th dose dependent sin 22 NA
311 21.69 precipitation 0.1 1440 > th dose independent rect. 15 4
322 21.69 temperature 30.0 10 < th dose dependent rect. 8 12
328 21.69 atmosphere 1005.0 10 > th dose dependent rect. 16 20
329 21.69 temperature 25.0 30 > th dose dependent rect. 9 22
339 21.70 precipitation 0.1 1440 < th dose independent rect. 6 21
368 21.70 precipitation 0.1 1440 < th dose dependent rect. 6 21
371 21.70 precipitation 0.1 1440 > th dose dependent rect. 5 22
401 21.72 radiation 10.0 90 > th dose independent rect. 6 2
424 21.72 precipitation 0.1 1440 < th dose independent rect. 6 17
426 21.72 precipitation 0.1 1440 < th dose independent rect. 9 18
428 21.72 precipitation 0.1 1440 > th dose independent rect. 6 21
434 21.72 precipitation 0.1 1440 > th dose dependent rect. 12 7
457 21.72 precipitation 0.1 1440 < th dose dependent rect. 6 17
460 21.72 precipitation 0.1 1440 < th dose dependent rect. 9 18
471 21.73 temperature 25.0 90 > th dose independent rect. 9 9
474 21.73 temperature 25.0 90 > th dose independent rect. 9 13
491 21.73 atmosphere 1005.0 10 > th dose dependent sin 7 NA
493 21.73 temperature 30.0 90 < th dose dependent rect. 7 5
570 21.75 precipitation 0.1 1440 > th dose independent rect. 9 18
575 21.75 temperature 30.0 90 < th dose independent rect. 15 21
578 21.75 temperature 10.0 90 > th dose dependent sin 1 NA
584 21.75 atmosphere 1005.0 90 > th dose dependent rect. 7 1
601 21.75 radiation 10.0 30 > th dose dependent rect. 16 17
619 21.76 precipitation 0.1 1440 < th dose independent rect. 13 14
647 21.76 temperature 30.0 10 < th dose dependent rect. 11 9
655 21.76 precipitation 0.1 1440 < th dose dependent rect. 13 14
666 21.76 temperature 15.0 90 > th dose dependent rect. 9 19
688 21.77 temperature 15.0 90 > th dose independent rect. 9 22
690 21.77 atmosphere 1005.0 10 > th dose dependent rect. 7 2
691 21.77 radiation 10.0 30 > th dose dependent rect. 6 3
720 21.77 precipitation 0.1 1440 > th dose dependent rect. 2 16
733 21.77 precipitation 0.1 1440 > th dose dependent rect. 21 21
738 21.78 temperature 25.0 90 < th dose independent rect. 10 1
773 21.78 temperature 30.0 270 < th dose dependent rect. 4 14
791 21.78 precipitation 0.1 720 > th dose dependent rect. 9 18
801 21.78 temperature 30.0 90 < th dose dependent rect. 15 21
830 21.79 humidity 90.0 14400 > th dose dependent rect. 1 1
832 21.79 humidity 90.0 14400 > th dose dependent rect. 24 3
861 21.79 temperature 15.0 90 > th dose dependent rect. 9 17
887 21.80 atmosphere 1000.0 14400 < th dose independent rect. 4 2
895 21.80 atmosphere 1010.0 30 < th dose independent rect. 9 17
899 21.80 atmosphere 1010.0 30 < th dose independent rect. 9 19
920 21.80 atmosphere 1010.0 270 < th dose dependent rect. 21 10