Os02g0147300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to U2 snRNP component prp10.
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Os02g0147300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to U2 snRNP component prp10.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.53 | 0.28 | 10.7 | 2.19 | 0.132 | -0.621 | 0.0831 | 2.16 | 0.627 | 16.5 | 20.85 | 1623 | -- | -- |
| 39.49 | 0.293 | 10.8 | 1.67 | 0.114 | -0.647 | 0.105 | -- | 0.457 | 16.2 | 11.19 | 4862 | -- | -- |
| 35.54 | 0.278 | 10.7 | 2.2 | 0.139 | -0.627 | -- | 2.19 | 0.629 | 16.5 | 20.93 | 1655 | -- | -- |
| 39.5 | 0.293 | 10.8 | 1.67 | 0.114 | -0.653 | -- | -- | 0.461 | 16.7 | 10.61 | 4902 | -- | -- |
| 36.13 | 0.28 | 10.7 | 2.14 | -- | -0.619 | -- | 1.97 | 0.613 | -- | 20.36 | 1386 | -- | -- |
| 46.84 | 0.321 | 10.8 | 1.36 | 0.118 | -- | 0.0945 | -- | 0.332 | 16 | -- | -- | -- | -- |
| 46.87 | 0.321 | 10.8 | 1.37 | 0.118 | -- | -- | -- | 0.332 | 15.9 | -- | -- | -- | -- |
| 39.02 | 0.291 | 10.8 | 1.58 | -- | -0.712 | -- | -- | 0.457 | -- | 14.28 | 1237 | -- | -- |
| 95.52 | 0.455 | 10.9 | -- | 0.146 | -0.146 | -- | -- | 0.184 | 16.3 | 26.87 | 473 | -- | -- |
| 47.63 | 0.322 | 10.8 | 1.36 | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
| 95.98 | 0.458 | 10.9 | -- | 0.0913 | -- | -- | -- | 0.18 | 16 | -- | -- | -- | -- |
| 96.01 | 0.456 | 10.9 | -- | -- | -0.0955 | -- | -- | 0.164 | -- | 28.5 | 1188 | -- | -- |
| 96.43 | 0.458 | 10.9 | -- | -- | -- | -- | -- | 0.178 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.71 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 2 | 33.71 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 3 | 33.72 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 7 | 33.73 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 11 | 33.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 18 | 34.12 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 20 | 34.21 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 21 | 34.22 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 22 | 34.22 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 24 | 34.24 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 36 | 34.24 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 40 | 34.35 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 41 | 34.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 49 | 34.37 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 55 | 34.42 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 59 | 34.45 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 60 | 34.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 65 | 34.48 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 84 | 34.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 95 | 34.60 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 113 | 34.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 133 | 34.74 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 136 | 34.76 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 155 | 34.78 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 162 | 34.81 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 188 | 34.84 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 15 | NA |
| 225 | 34.91 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 5 | 6 |
| 230 | 34.94 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 244 | 34.96 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 284 | 35.07 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 337 | 35.25 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 343 | 35.26 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 360 | 35.30 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 388 | 35.36 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 407 | 35.39 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 458 | 35.45 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 17 | 19 |
| 481 | 35.49 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 496 | 35.51 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 502 | 35.51 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 582 | 35.58 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 593 | 35.59 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 609 | 35.60 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 617 | 35.61 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 695 | 35.65 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 696 | 35.66 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 707 | 35.66 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 21 |
| 710 | 35.67 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 714 | 35.67 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 722 | 35.67 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 14 | 14 |
| 742 | 35.68 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 755 | 35.68 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 801 | 35.71 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 852 | 35.73 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 914 | 35.78 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 933 | 35.79 | radiation | 1.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 938 | 35.79 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |