BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0147300 Os02g0147300|Os02g0147300
         (1158 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64270.1  | chr5:25706909-25710718 FORWARD LENGTH=1270        1517   0.0  

>AT5G64270.1 | chr5:25706909-25710718 FORWARD LENGTH=1270
          Length = 1269

 Score = 1517 bits (3928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/797 (92%), Positives = 765/797 (95%)

Query: 362  PQEGLYALRQLTDKAREFGAGPLFNKILPLLMQPTIEDQERHLLVKVIDRVLYKLDELVR 421
            P +   ALRQLTDKARE GAGPLFNKILPLLMQPT+EDQERHLLVKVIDR+LYKLDE+VR
Sbjct: 473  PPQRKTALRQLTDKARELGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRILYKLDEMVR 532

Query: 422  PFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTT 481
            P+VHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLA+MIAAMRPDIDNIDEYVRNTT
Sbjct: 533  PYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLASMIAAMRPDIDNIDEYVRNTT 592

Query: 482  ARAFSVVASALGTPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLKSLVE 541
            ARAFSVVASALG PALLPFLKAVCQSK+SWQARHTGIKIVQQIAIL+GCAVLPHL+SLVE
Sbjct: 593  ARAFSVVASALGIPALLPFLKAVCQSKRSWQARHTGIKIVQQIAILIGCAVLPHLRSLVE 652

Query: 542  IIEHGLSDENQKVRXXXXXXXXXXXXXXXPYGIESFDTVLKPLWKGIRSHRGKVLAAFLK 601
            IIEHGLSDENQKVR               PYGIESFD+VLKPLWKGIRSHRGKVLAAFLK
Sbjct: 653  IIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLK 712

Query: 602  AIGFIIPLMDALYASYYTKEVMQILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRN 661
            AIGFIIPLMDA+YASYYTKEVM ILIREFQSPDEEMKKIVLKVVKQCVSTEGVE +YIR+
Sbjct: 713  AIGFIIPLMDAIYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEPEYIRS 772

Query: 662  DILPEFFRHFWVRRMALDRRNYKQLVETTVEMANKVGVADIVGRIVEDLKDESEPYRRMV 721
            DILPEFFR+FW R+MAL+RRNYKQLVETTVE+ANKVGVADIVGR+VEDLKDESE YRRMV
Sbjct: 773  DILPEFFRNFWTRKMALERRNYKQLVETTVEVANKVGVADIVGRVVEDLKDESEQYRRMV 832

Query: 722  METIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKP 781
            METI+KVV NLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKP
Sbjct: 833  METIDKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKP 892

Query: 782  YLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYP 841
            YLPQICGTIKWRLNNKSAKVRQQAADLISRIA+VMKQC EEQLMGHLGVVLYEYLGEEYP
Sbjct: 893  YLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYP 952

Query: 842  EVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGA 901
            EVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGA
Sbjct: 953  EVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGA 1012

Query: 902  EFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQ 961
            EFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQ
Sbjct: 1013 EFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQ 1072

Query: 962  NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIY 1021
            NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIY
Sbjct: 1073 NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIY 1132

Query: 1022 AVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVI 1081
            AVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLN++WPNIFETSPHVI
Sbjct: 1133 AVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVI 1192

Query: 1082 NAVMEAIEGMRVALGPAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPAL 1141
            NAVMEAIEGMRVALG AVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQD LVAAYP L
Sbjct: 1193 NAVMEAIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDTLVAAYPVL 1252

Query: 1142 DDDGDNIYSRPELAMFV 1158
            +D+ +N+YSRPEL MFV
Sbjct: 1253 EDEQNNVYSRPELTMFV 1269




 Score =  234 bits (596), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/402 (39%), Positives = 190/402 (47%), Gaps = 56/402 (13%)

Query: 1   MDGIDAELARAQEERKKMEEALAAGAPMAVSSVTFDTDLYGGGGSDPNRFAGYDTSIXXX 60
           M  +D E+A+ QEER+KME  LA     +++S+TFD DLYGG     N  A Y TSI   
Sbjct: 1   MADLDPEIAKTQEERRKMEADLA-----SLTSLTFDRDLYGG-----NDRASYSTSIAPN 50

Query: 61  XXXXXXXXXXXXVNPAARRLASYTGHAVAAPDI--PRAAEDDGLPKKSQXXXXXXXXXXX 118
                       +   A+RLASYT       D+  P   +DD   K  Q           
Sbjct: 51  EEDDANLDTTGSL--VAQRLASYTAPRSILNDVARPHNEDDDVGFKPRQSIAEREGEYRN 108

Query: 119 XXXXXXXSPERHDPFAAGEATPDPSLRRXXXXXXXXXXXXXVPEQQPV------------ 166
                  SP+R D FA G+ TPD S+R                E   +            
Sbjct: 109 RRLNRVLSPDRVDAFAMGDKTPDASVRTYTDHMRETALQREKEETMRLIAKKKKEEEEAA 168

Query: 167 -----------------AAPKRRNRWDQSQDGDASAAVGSKKAKTSSDWDAPDATPGIGR 209
                            ++ KRR+RWD  ++     A   K    SSDWD PDA PGIGR
Sbjct: 169 AKHQKDSAPPPPASSSSSSSKRRHRWDLPEE---DGAAAKKAKAASSDWDLPDAAPGIGR 225

Query: 210 WDA-TPGRVGDATPSV-RRNRWDETPTPGRMXXXXXXXXXXXXXXXXXXXXXWDATPKLP 267
           WDA TPGRV DATPS  RRNRWDETPTPGR+                     WD      
Sbjct: 226 WDAPTPGRVSDATPSAGRRNRWDETPTPGRVTDSDATPGGGVTPGATPSGVTWD------ 279

Query: 268 GGLVTPTPKKQRSRWDETPASMXXXXXXXXXXXXXXXXXXXXXXXXXDNLATPTPGQIAS 327
            GL TPTPK+QRSRWDETPA+M                         D +ATPTPGQ+  
Sbjct: 280 -GLATPTPKRQRSRWDETPATMGSATPMGGVTPGAAYTPGVTPIGGID-MATPTPGQLIF 337

Query: 328 RGPMTPEQYQLLRWERDIEERNRPLTDEELDTMFPQEGLYAL 369
           RGPMTPEQ  + RWE+DIEERNRPL+DEELD MFP++G   L
Sbjct: 338 RGPMTPEQLNMQRWEKDIEERNRPLSDEELDAMFPKDGYKVL 379



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.136    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 22,583,852
Number of extensions: 875553
Number of successful extensions: 2342
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2325
Number of HSP's successfully gapped: 4
Length of query: 1158
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 1049
Effective length of database: 8,118,225
Effective search space: 8516018025
Effective search space used: 8516018025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)