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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0142100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.97 (0.022) R2 : 0.000226
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0149 (0.0462) R2dN8 : 0.000292 R2N8 : 0.000226
σ : 0.414
deviance : 78.53
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.29 0.402 2.96 0.238 0.106 -0.821 0.132 -0.694 0.0803 9.49 7.845 1654 -- --
73.35 0.399 2.95 0.226 0.108 -0.683 0.0985 -- 0.0807 9.43 7.5 1663 -- --
73.36 0.399 2.95 0.24 0.106 -0.797 -- -0.568 0.081 9.37 7.861 1653 -- --
73.39 0.399 2.95 0.233 0.106 -0.687 -- -- 0.0823 9.41 7.6 1663 -- --
74 0.401 2.96 0.231 -- -0.749 -- -0.419 0.0802 -- 7.893 1653 -- --
77.82 0.414 2.96 0.0801 0.0854 -- 0.163 -- 0.0239 9.55 -- -- -- --
77.92 0.413 2.96 0.086 0.0851 -- -- -- 0.0241 9.39 -- -- -- --
74.01 0.401 2.95 0.221 -- -0.662 -- -- 0.0811 -- 7.801 1653 -- --
74.56 0.402 2.95 -- 0.0873 -0.562 -- -- 0.0724 9.18 9.7 1687 -- --
78.34 0.414 2.96 0.0856 -- -- -- -- 0.0244 -- -- -- -- --
78.11 0.413 2.96 -- 0.0851 -- -- -- 0.0145 9.32 -- -- -- --
74.99 0.403 2.96 -- -- -0.553 -- -- 0.0438 -- 9.651 1662 -- --
78.53 0.414 2.97 -- -- -- -- -- 0.0149 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 64.70 temperature 25 10 > th dose dependent rect. 13 1
3 67.94 temperature 25 30 > th dose independent rect. 4 1
6 68.41 temperature 25 90 > th dose dependent rect. 4 1
8 68.80 humidity 90 10 < th dose independent rect. 4 1
10 69.00 wind 1 30 > th dose dependent rect. 4 1
11 69.14 atmosphere 1005 10 < th dose independent rect. 13 1
25 69.57 wind 7 720 > th dose dependent rect. 2 7
26 69.65 wind 7 720 > th dose independent rect. 2 7
54 70.70 radiation 10 10 > th dose independent rect. 13 1
61 70.84 wind 5 720 > th dose independent rect. 3 2
62 70.84 wind 5 720 > th dose dependent rect. 3 2
65 70.86 atmosphere 1010 30 < th dose dependent rect. 13 1
80 71.04 wind 5 720 > th dose dependent rect. 5 2
82 71.06 wind 5 720 > th dose independent rect. 5 2
130 71.49 wind 7 720 > th dose dependent rect. 7 1
137 71.53 wind 7 720 > th dose independent rect. 7 1
149 71.62 wind 1 30 > th dose independent rect. 4 1
156 71.67 radiation 30 90 < th dose independent rect. 12 2
157 71.67 wind 5 720 < th dose independent rect. 3 7
159 71.67 wind 1 720 > th dose dependent rect. 2 11
168 71.79 wind 9 720 > th dose dependent rect. 9 1
183 71.82 radiation 30 10 < th dose independent rect. 14 1
187 71.83 wind 3 720 > th dose independent rect. 2 12
217 72.02 wind 5 720 < th dose independent rect. 1 9
219 72.02 wind 7 720 < th dose dependent rect. 3 8
246 72.15 wind 3 30 > th dose independent rect. 13 1
247 72.17 humidity 80 30 < th dose independent rect. 13 1
259 72.23 wind 7 720 < th dose dependent rect. 1 10
291 72.43 wind 9 720 > th dose independent rect. 9 1
324 72.54 humidity 60 30 > th dose independent rect. 13 1
330 72.58 temperature 25 30 > th dose independent rect. 13 1
337 72.60 wind 7 10 < th dose independent rect. 13 1
372 72.76 wind 9 1440 < th dose independent rect. 15 2
383 72.80 wind 9 1440 > th dose independent rect. 15 2
403 72.87 wind 7 1440 > th dose dependent rect. 15 2
404 72.88 wind 7 720 < th dose dependent sin 5 NA
409 72.89 wind 7 4320 > th dose dependent rect. 5 4
442 72.98 wind 7 4320 < th dose independent rect. 7 1
445 72.98 wind 7 4320 > th dose dependent rect. 7 1
451 73.00 wind 5 720 < th dose independent sin 6 NA
458 73.02 wind 7 4320 < th dose independent rect. 4 5
464 73.04 wind 7 4320 > th dose independent rect. 4 5
501 73.11 wind 9 1440 > th dose dependent rect. 14 20
504 73.12 wind 7 4320 < th dose independent rect. 24 9
506 73.13 wind 7 4320 > th dose independent rect. 7 1
512 73.14 wind 7 4320 > th dose independent rect. 24 9
523 73.16 wind 7 4320 > th dose dependent rect. 4 2
526 73.17 wind 7 4320 < th dose independent rect. 4 1
529 73.17 wind 9 1440 < th dose independent rect. 15 19
538 73.18 wind 7 4320 > th dose dependent rect. 24 9
551 73.20 wind 7 4320 > th dose independent rect. 4 2
632 73.29 wind 5 720 > th dose independent sin 6 NA
644 73.30 wind 9 1440 > th dose independent rect. 14 20
655 73.31 wind 1 720 > th dose dependent sin 6 NA
662 73.32 wind 7 4320 < th dose independent rect. 24 5
668 73.32 wind 9 1440 < th dose independent rect. 15 14
674 73.33 wind 1 43200 > th dose independent rect. 24 6
683 73.33 wind 9 1440 > th dose dependent rect. 14 12
694 73.34 wind 9 1440 < th dose independent rect. 15 11
701 73.35 temperature 30 10 < th dose independent rect. 13 1
704 73.35 wind 1 43200 < th dose independent rect. 24 5
710 73.35 wind 9 1440 > th dose dependent rect. 14 9
718 73.36 wind 7 4320 > th dose independent rect. 24 5
730 73.37 wind 1 43200 < th dose independent rect. 23 7
745 73.38 wind 9 1440 < th dose independent rect. 15 8
800 73.41 wind 9 1440 > th dose independent rect. 14 12
844 73.43 wind 9 1440 > th dose independent rect. 14 9