Os02g0139100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0139100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 216.15 | 0.691 | 11.8 | -0.281 | 1.7 | 2.84 | 1.49 | 0.234 | 0.118 | 15.4 | 15.59 | 12 | 23.4 | -- |
| 215.8 | 0.689 | 11.8 | -0.294 | 1.66 | 2.8 | 1.53 | -- | 0.116 | 15.1 | 16.22 | 12 | 23.4 | -- |
| 222.37 | 0.695 | 11.8 | -0.261 | 1.56 | 3.08 | -- | 0.305 | 0.118 | 16 | 15.54 | 12 | 22.9 | -- |
| 222.48 | 0.695 | 11.8 | -0.304 | 1.64 | 3.13 | -- | -- | 0.108 | 16 | 15.3 | 12 | 23 | -- |
| 241.43 | 0.724 | 11.7 | -0.225 | -- | 2.97 | -- | 1.15 | 0.266 | -- | 15.05 | 41 | 20.3 | -- |
| 278.4 | 0.782 | 11.6 | 0.0365 | 2.02 | -- | 1.52 | -- | 0.463 | 11.3 | -- | -- | -- | -- |
| 288.22 | 0.795 | 11.6 | 0.0973 | 2.01 | -- | -- | -- | 0.468 | 11.2 | -- | -- | -- | -- |
| 243.32 | 0.727 | 11.7 | -0.297 | -- | 3 | -- | -- | 0.212 | -- | 15.38 | 36 | 20.4 | -- |
| 224.66 | 0.702 | 11.8 | -- | 1.58 | 2.92 | -- | -- | 0.16 | 15.6 | 15.76 | 12 | 23 | -- |
| 541.47 | 1.09 | 11.7 | 0.0482 | -- | -- | -- | -- | 0.45 | -- | -- | -- | -- | -- |
| 288.47 | 0.795 | 11.6 | -- | 2.01 | -- | -- | -- | 0.457 | 11.2 | -- | -- | -- | -- |
| 244.1 | 0.728 | 11.7 | -- | -- | 2.94 | -- | -- | 0.269 | -- | 14.29 | 5 | 20 | -- |
| 541.53 | 1.09 | 11.7 | -- | -- | -- | -- | -- | 0.445 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 213.25 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 4 | 216.63 | temperature | 15.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 5 | 216.79 | temperature | 30.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 21 | 219.47 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 24 | 219.55 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 53 | 223.74 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 14 |
| 58 | 224.19 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 61 | 224.63 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 15 |
| 87 | 226.31 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 98 | 227.10 | temperature | 25.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 114 | 228.13 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 131 | 228.99 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 158 | 230.27 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 229 | 232.64 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 6 | 2 |
| 247 | 233.11 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 274 | 233.92 | temperature | 25.0 | 30 | > th | dose independent | sin | 5 | NA |
| 289 | 234.37 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 12 |
| 346 | 235.42 | temperature | 25.0 | 30 | < th | dose independent | sin | 5 | NA |
| 415 | 236.71 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 11 |
| 426 | 236.86 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 436 | 236.96 | radiation | 1.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 447 | 237.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 473 | 237.52 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 5 |
| 478 | 237.60 | radiation | 10.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 489 | 237.73 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 494 | 237.79 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 499 | 237.87 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 506 | 237.97 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 529 | 238.41 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 532 | 238.43 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 9 |
| 551 | 238.69 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 554 | 238.70 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 560 | 238.80 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 573 | 238.93 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 13 |
| 581 | 239.06 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 600 | 239.25 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 614 | 239.42 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 621 | 239.54 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 14 | 4 |
| 625 | 239.58 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 630 | 239.63 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 631 | 239.63 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 641 | 239.74 | radiation | 1.0 | 270 | < th | dose independent | sin | 8 | NA |
| 648 | 239.76 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 652 | 239.80 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 663 | 239.92 | radiation | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 670 | 239.97 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 698 | 240.21 | radiation | 1.0 | 270 | > th | dose independent | sin | 8 | NA |
| 720 | 240.34 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 722 | 240.35 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 730 | 240.37 | wind | 5.0 | 90 | < th | dose independent | rect. | 17 | 13 |
| 739 | 240.41 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 788 | 240.78 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 800 | 240.86 | temperature | 25.0 | 90 | < th | dose independent | rect. | 2 | 6 |
| 804 | 240.89 | humidity | 50.0 | 720 | > th | dose independent | rect. | 5 | 13 |
| 836 | 241.12 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 12 |
| 850 | 241.23 | humidity | 50.0 | 720 | > th | dose independent | rect. | 14 | 3 |
| 851 | 241.23 | wind | 7.0 | 90 | < th | dose dependent | rect. | 6 | 5 |
| 866 | 241.36 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 889 | 241.49 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 8 |
| 892 | 241.52 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 11 | 9 |
| 894 | 241.52 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 11 | 9 |
| 900 | 241.55 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 11 | 19 |
| 901 | 241.55 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 11 | 19 |
| 906 | 241.57 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 908 | 241.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 915 | 241.63 | wind | 1.0 | 90 | > th | dose independent | rect. | 11 | 9 |
| 959 | 241.84 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 971 | 241.94 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 991 | 242.06 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 19 |
| 999 | 242.10 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 5 |