Os02g0137800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0137800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.91 | 0.289 | 12.8 | -0.635 | 1.51 | -0.778 | 0.195 | 0.22 | -0.085 | 4.87 | 68.48 | 919 | -- | -- |
| 37.94 | 0.287 | 12.8 | -0.644 | 1.53 | -0.759 | 0.21 | -- | -0.0836 | 4.9 | 67.69 | 953 | -- | -- |
| 38.01 | 0.287 | 12.8 | -0.637 | 1.51 | -0.781 | -- | 0.218 | -0.0877 | 4.88 | 68.1 | 915 | -- | -- |
| 38.05 | 0.287 | 12.8 | -0.645 | 1.52 | -0.761 | -- | -- | -0.0881 | 4.89 | 67.8 | 914 | -- | -- |
| 79.02 | 0.414 | 12.8 | -0.671 | -- | -1.87 | -- | 0.482 | 0.0468 | -- | 130.4 | 386 | -- | -- |
| 47.41 | 0.323 | 12.7 | -0.757 | 1.55 | -- | 0.286 | -- | 0.00653 | 5.24 | -- | -- | -- | -- |
| 47.61 | 0.323 | 12.7 | -0.756 | 1.55 | -- | -- | -- | 0.00521 | 5.24 | -- | -- | -- | -- |
| 79.47 | 0.415 | 12.7 | -0.691 | -- | -1.87 | -- | -- | 0.0723 | -- | 185.7 | 390 | -- | -- |
| 48.15 | 0.323 | 12.8 | -- | 1.6 | -0.983 | -- | -- | -0.0608 | 4.96 | 59.55 | 1080 | -- | -- |
| 172.87 | 0.614 | 12.7 | -0.702 | -- | -- | -- | -- | 0.044 | -- | -- | -- | -- | -- |
| 62.69 | 0.37 | 12.7 | -- | 1.54 | -- | -- | -- | 0.0894 | 5.26 | -- | -- | -- | -- |
| 89.67 | 0.441 | 12.7 | -- | -- | -1.81 | -- | -- | 0.0679 | -- | 85 | 405 | -- | -- |
| 185.88 | 0.636 | 12.7 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.21 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 3 | 36.63 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 12 |
| 5 | 36.93 | radiation | 10.0 | 720 | < th | dose independent | sin | 13 | NA |
| 14 | 37.58 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 7 |
| 16 | 37.66 | humidity | 50.0 | 720 | > th | dose independent | rect. | 1 | 20 |
| 18 | 37.78 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 16 |
| 23 | 37.86 | humidity | 50.0 | 720 | > th | dose independent | rect. | 9 | 13 |
| 24 | 37.87 | humidity | 50.0 | 720 | > th | dose independent | rect. | 10 | 11 |
| 28 | 37.96 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 32 | 38.09 | radiation | 10.0 | 720 | < th | dose independent | rect. | 1 | 20 |
| 43 | 38.24 | radiation | 10.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 44 | 38.25 | humidity | 50.0 | 720 | > th | dose independent | rect. | 10 | 18 |
| 50 | 38.31 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 51 | 38.31 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 13 | 21 |
| 64 | 38.44 | radiation | 10.0 | 720 | < th | dose independent | rect. | 13 | 19 |
| 81 | 38.55 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 13 | 7 |
| 98 | 38.60 | humidity | 70.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 138 | 38.71 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 7 | 14 |
| 164 | 38.77 | radiation | 1.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 172 | 38.80 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 178 | 38.83 | radiation | 20.0 | 270 | > th | dose independent | sin | 13 | NA |
| 188 | 38.85 | humidity | 50.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 192 | 38.86 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 194 | 38.87 | humidity | 70.0 | 720 | < th | dose independent | rect. | 14 | 20 |
| 195 | 38.87 | radiation | 10.0 | 720 | < th | dose independent | rect. | 8 | 22 |
| 206 | 38.92 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 216 | 38.93 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 218 | 38.94 | humidity | 60.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 230 | 38.96 | radiation | 10.0 | 720 | < th | dose independent | rect. | 8 | 13 |
| 236 | 38.98 | humidity | 70.0 | 720 | < th | dose independent | sin | 14 | NA |
| 276 | 39.05 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 20 |
| 305 | 39.10 | humidity | 70.0 | 720 | < th | dose independent | rect. | 14 | 6 |
| 331 | 39.13 | humidity | 70.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 332 | 39.13 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 361 | 39.14 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 391 | 39.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 393 | 39.19 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 398 | 39.20 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 440 | 39.25 | humidity | 70.0 | 720 | < th | dose dependent | no | NA | NA |
| 441 | 39.25 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 9 | 11 |
| 536 | 39.26 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 571 | 39.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 589 | 39.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 599 | 39.34 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 20 |
| 635 | 39.38 | radiation | 30.0 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 649 | 39.39 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 654 | 39.39 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 664 | 39.40 | humidity | 60.0 | 720 | > th | dose independent | sin | 12 | NA |
| 668 | 39.40 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 678 | 39.41 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 680 | 39.42 | humidity | 50.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 713 | 39.46 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 772 | 39.53 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 782 | 39.54 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 800 | 39.56 | radiation | 10.0 | 720 | < th | dose independent | no | NA | NA |
| 821 | 39.58 | radiation | 10.0 | 720 | < th | dose dependent | no | NA | NA |